Description
This panel was developed and is maintained by VCGS.

It contains genes typically associated with isolated hypertrophic cardiomyopathy, with onset in adolescence or adulthood. For early onset hypertrophic cardiomyopathy, or in the presence of additional features suggestive of an underlying metabolic or syndromic disorder please consider the Cardiomyopathy_Paediatric panel. Where the type of cardiomyopathy is unclear, consider using the Cardiomyopathy Superpanel.

This panel has been compared against the Genomics England 'Hypertrophic Cardiomyopathy  - teen and adult' panel and incorporates gene disease validity assessments by the ClinGen HCM working group (PMID: 30681346), 5/8/2020.

14 reviewers

  • Kristin Rigbye (Victorian Clinical Genetics Services)

  • Paul De Fazio (Victorian Clinical Genetics Services)

  • Ivan Macciocca (Victorian Clinical Genetics Services)

  • Anna Ritchie (Victorian Clinical Genetics Services)

  • Ain Roesley (Victorian Clinical Genetics Services)

  • Dean Phelan (Victorian Clinical Genetics Services)

  • Sarah Pantaleo (Victorian Clinical Genetics Services)

  • Bryony Thompson (Royal Melbourne Hospital)

  • Seb Lunke (Victorian Clinical Genetics Services)

  • Naomi Baker (Victorian Clinical Genetics Services)

  • Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)

  • Karina Sandoval (Victorian Clinical Genetics Services)

  • Daniel Flanagan (Victorian Clinical Genetics Services)

  • Chern Lim (Victorian Clinical Genetics Services)

55 Entities

55 reviewed, 26 green

List Entity Reviews Mode of inheritance Details
55 Entitiess
Green Green List (high evidence)
ACTC1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Cardiomyopathy, hypertrophic, 11 612098
Tags
Green Green List (high evidence)
ACTN2
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Cardiomyopathy, hypertrophic, 23, with or without LVNC, MIM# 612158
Tags
Green Green List (high evidence)
ALPK3
2 reviews
2 green
BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Cardiomyopathy, familial hypertrophic 27, MIM# 618052
Tags
Green Green List (high evidence)
C1QBP
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Combined oxidative phosphorylation deficiency 33, MIM#617713
Tags
Green Green List (high evidence)
CSRP3
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Cardiomyopathy, hypertrophic, 12, MIM# 612124
Tags
Green Green List (high evidence)
FHL1
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Emery-Dreifuss muscular dystrophy 6, X-linked, MIM# 300696
Tags
Green Green List (high evidence)
FHOD3
3 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Cardiomyopathy, familial hypertrophic, 28, MIM# 619402
Tags
  • SV/CNV
Green Green List (high evidence)
FLNC
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Cardiomyopathy, familial hypertrophic, 26
Tags
Green Green List (high evidence)
GLA
2 reviews
1 green 1 red
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Fabry disease (MIM# 301500)
Tags
Green Green List (high evidence)
KLHL24
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Cardiomyopathy, familial hypertrophic, 29, with polyglucosan bodies, MIM# 620236
Tags
Green Green List (high evidence)
LAMP2
2 reviews
1 green 1 red
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Danon disease (MIM#300257)
Tags
Green Green List (high evidence)
MT-TI
2 reviews
MITOCHONDRIAL
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Hypertrophic cardiomyopathy
Tags
  • mtDNA
Green Green List (high evidence)
MYBPC3
2 reviews
2 green
BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Cardiomyopathy, dilated, 1MM, 615396
  • Cardiomyopathy, hypertrophic, 4, 115197
  • Left ventricular noncompaction 10, 615396
Tags
Green Green List (high evidence)
MYH7
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Cardiomyopathy, hypertrophic, 1, MIM# 192600
Tags
Green Green List (high evidence)
MYL2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Cardiomyopathy, hypertrophic, 10, MIM# 608758
Tags
Green Green List (high evidence)
MYL3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Cardiomyopathy, hypertrophic, 8, MIM# 608751
Tags
Green Green List (high evidence)
PLN
1 review
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Cardiomyopathy, hypertrophic, 18 (MIM #613874)
Tags
Green Green List (high evidence)
PRKAG2
2 reviews
1 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Cardiomyopathy, hypertrophic 6, MIM# 600858
Tags
Green Green List (high evidence)
RPS6KB1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Hypertrophic cardiomyopathy, MONDO:0005045, RPS6KB1-related
Tags
Green Green List (high evidence)
TNNI3
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Cardiomyopathy, hypertrophic, 7, MIM# 613690
Tags
Green Green List (high evidence)
TNNT2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Cardiomyopathy, hypertrophic, 2, MIM# 115195
Tags
Green Green List (high evidence)
TPM1
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Cardiomyopathy, dilated, 1Y, 611878
  • Cardiomyopathy, hypertrophic, 3, 115196
  • Left ventricular noncompaction 9, 611878
Tags
Green Green List (high evidence)
TRIM63
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Hypertrophic cardiomyopathy, MONDO:0005045
Tags
Green Green List (high evidence)
TTR
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Amyloidosis, hereditary, transthyretin-related MIM#105210
Tags
  • treatable
Green Green List (high evidence)
TULP3
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Hepatorenocardiac degenerative fibrosis, MIM# 619902
Tags
Green Green List (high evidence)
UQCRFS1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Mitochondrial Complex III deficiency
  • lactic acidosis
  • fetal bradycardia
  • hypertrophic cardiomyopathy
  • alopecia totalis
Tags
Amber Amber List (moderate evidence)
CACNA1C
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Amber
Phenotypes
  • Hypertrophic cardiomyopathy, MONDO:0005045, CACNA1C-related
Tags
Amber Amber List (moderate evidence)
GYG1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Amber
Phenotypes
  • Hypertrophic Cardiomyopathy
Tags
Amber Amber List (moderate evidence)
JPH2
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Victorian Clinical Genetics Services
Phenotypes
  • Cardiomyopathy, hypertrophic, MIM#613873
Tags
Amber Amber List (moderate evidence)
NEBL
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Hypertrophic cardiomyopathy
  • dilated cardiomyopathy
Tags
Amber Amber List (moderate evidence)
TNNC1
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Victorian Clinical Genetics Services
Phenotypes
  • Cardiomyopathy, hypertrophic, 13 (MIM# 613243)
Tags
Amber Amber List (moderate evidence)
TTN
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Victorian Clinical Genetics Services
Phenotypes
  • Hypertrophic cardiomyopathy
Tags
Red Red List (low evidence)
ANKRD1
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • hypertrophic cardiomyopathy
Tags
Red Red List (low evidence)
CALR3
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Hypertrophic cardiomyopathy
Tags
  • refuted
Red Red List (low evidence)
CAV3
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Cardiomyopathy, familial hypertrophic, MIM# 192600
Tags
Red Red List (low evidence)
CORIN
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Red
Phenotypes
  • ?Cardiomyopathy, familial hypertrophic, 30, atrial (MIM:620734)
Tags
Red Red List (low evidence)
DES
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Hypertrophic cardiomyopathy
  • Dilated cardiomyopathy
  • Myofibrillar myopathy
  • ARVC
Tags
Red Red List (low evidence)
DNAJB4
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Myopathy, MONDO:0005336, DNAJB4-related
Tags
Red Red List (low evidence)
FXN
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Friedreich ataxia MIM#229300
Tags
Red Red List (low evidence)
GAA
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Glycogen storage disease II, MIM#232300
Tags
Red Red List (low evidence)
KLF10
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • HCM
Tags
Red Red List (low evidence)
MYH6
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Hypertrophic cardiomyopathy
Tags
Red Red List (low evidence)
MYLK2
2 reviews
2 red
Other
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Cardiomyopathy, hypertrophic, 1, digenic, 192600
Tags
Red Red List (low evidence)
MYOM1
2 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Hypertrophic cardiomyopathy, MONDO:0005045
Tags
Red Red List (low evidence)
MYOZ2
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Cardiomyopathy, hypertrophic, 16 MIM#613838
Tags
Red Red List (low evidence)
MYPN
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Cardiomyopathy, hypertrophic, 22 (MIM# 615248)
Tags
Red Red List (low evidence)
NEXN
2 reviews
2 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Cardiomyopathy, hypertrophic, 20, MIM# 613876
Tags
Red Red List (low evidence)
OBSCN
2 reviews
2 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Hypertrophic cardiomyopathy
Tags
Red Red List (low evidence)
PDLIM3
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Hypertrophic cardiomyopathy
Tags
Red Red List (low evidence)
PTPN11
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Noonan syndrome 1 MIM# 163950
Tags
Red Red List (low evidence)
RAF1
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Cardiomyopathy, dilated, 1NN MIM#615916
  • Noonan syndrome 5 MIM#611553
Tags
Red Red List (low evidence)
RYR2
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Hypertrophic cardiomyopathy
Tags
Red Red List (low evidence)
SLC25A4
1 review
1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Mitochondrial DNA depletion syndrome 12A (cardiomyopathic type) AD MIM#617184
  • Mitochondrial DNA depletion syndrome 12B (cardiomyopathic type) AR MIM#615418
  • Progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal dominant 2 MIM#609283
Tags
Red Red List (low evidence)
TCAP
3 reviews
2 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Cardiomyopathy, hypertrophic, 25, MIM# 607487
Tags
  • disputed
Red Red List (low evidence)
VCL
2 reviews
2 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Cardiomyopathy, hypertrophic, 15, MIM# 613255
Tags

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