Description
This is a superpanel of all VCGS immunological disorders panels.

759 Entities

681 reviewed, 574 green

List Entity Reviews Mode of inheritance Details
759 Entities
Green Green List (high evidence)
ACP5
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Spondyloenchondrodysplasia with immune dysregulation, MIM# 607944
  • Short stature
  • SLE, thrombocytopenia and autoimmune haemolytic anaemia
  • Possibly recurrent bacterial and viral infections
Tags
Green Green List (high evidence)
ACP5
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
ADA
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
ADA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Severe combined immunodeficiency due to ADA deficiency, MIM# 102700
  • MONDO:0007064
Tags
Green Green List (high evidence)
ADA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Severe combined immunodeficiency due to ADA deficiency, MIM# 102700
  • MONDO:0007064
Tags
Green Green List (high evidence)
ADA2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Vasculitis, autoinflammation, immunodeficiency, and hematologic defects syndrome MIM#615688
  • common variable immunodeficiency
Tags
Green Green List (high evidence)
ADA2
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
ADA2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Vasculitis, autoinflammation, immunodeficiency, and haematologic defects syndrome, MIM# 615688
Tags
Green Green List (high evidence)
ADAM17
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Inflammatory skin and bowel disease, neonatal, 1, MIM# 614328
  • Recurrent infections
Tags
Green Green List (high evidence)
ADAM17
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • Inflammatory skin and bowel disease, neonatal, 1, MIM# 614328
  • Recurrent infections
Tags
Green Green List (high evidence)
ADAR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Aicardi-Goutieres syndrome 6, MIM# 615010
Tags
Green Green List (high evidence)
ADAR
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
AICDA
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
AICDA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency with hyper-IgM, type 2, MIM# 605258
Tags
Green Green List (high evidence)
AIRE
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoimmune polyendocrinopathy syndrome , type I, with or without reversible metaphyseal dysplasia, MIM# 240300
Tags
Green Green List (high evidence)
AIRE
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Autoimmune polyendocrinopathy syndrome , type I, with or without reversible metaphyseal dysplasia, MIM#240300
Tags
Green Green List (high evidence)
AK2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Reticular dysgenesis MIM# 267500
  • Combined immunodeficiency
  • neutropaenia
  • leukopaenia
  • lymphopaenia
  • agranulocytosis
  • deafness
  • MONDO:0009973
Tags
  • treatable
Green Green List (high evidence)
AK2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Reticular dysgenesis MIM# 267500
  • MONDO:0009973
  • Combined immunodeficiency
  • neutropaenia
  • leukopaenia
  • lymphopaenia
  • agranulocytosis
  • deafness
Tags
  • treatable
Green Green List (high evidence)
ALPK1
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Retinal dystrophy, optic nerve edema, splenomegaly, anhidrosis, and migraine headache (ROSAH) syndrome, MIM#614979
  • Periodic fever, aphthous stomatitis, pharyngitis and adenitis (PFAPA) syndrome
Tags
Green Green List (high evidence)
ANKZF1
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Other
Phenotypes
  • Infantile-onset inflammatory bowel disease, MONDO:0005265, ANKZF1-related
Tags
Green Green List (high evidence)
AP3B1
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
  • clinical trial
  • treatable
Green Green List (high evidence)
AP3D1
2 reviews
1 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Hermansky-Pudlak syndrome 10, MIM# 617050
  • Oculocutaneous albinism
  • Severe neutropaenia
  • Recurrent infections
  • Seizures
  • Hearing loss
  • Neurodevelopmental delay
Tags
Green Green List (high evidence)
ARPC1B
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Platelet abnormalities with eosinophilia and immune-mediated inflammatory disease 617718
Tags
  • treatable
Green Green List (high evidence)
ARPC5
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 133 with autoimmunity and autoinflammation, MIM# 620565
Tags
Green Green List (high evidence)
ARPC5
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 133 with autoimmunity and autoinflammation, MIM# 620565
Tags
Green Green List (high evidence)
ATM
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Ataxia-telangiectasia MIM# 208900
  • Progressive T cell decrease, poor T-cell proliferation to mitogens
  • low IgA, IgE and IgG
  • increased IgM monomers
  • antibodies variably decreased
  • Ataxia
  • telangiectasia especially of sclerae
  • pulmonary infections
  • lymphoreticular and other malignancies
  • increased alpha fetoprotein
  • increased radiosensitivity, chromosomal instability and chromosomal translocations
Tags
Green Green List (high evidence)
ATP6AP1
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 47, MIM# 300972
  • Hepatopathy
  • Leukopenia
  • Low copper
Tags
Green Green List (high evidence)
ATP6AP1
2 reviews
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 47, MIM#300972
Tags
Green Green List (high evidence)
B2M
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 43 MIM# 241600
  • Sinopulmonary infections
  • Purple-red skin lesions
  • Decreased serum IgG
  • Decreased B cells
  • Absent β2m associated proteins MHC-I, CD1a, CD1b, and CD1c
  • MONDO:0009434
Tags
Green Green List (high evidence)
BACH2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 60, MIM# 618394
  • inflammatory bowel disease
  • recurrent sinopulmonary infections
Tags
Green Green List (high evidence)
BACH2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 60, MIM# 618394
  • inflammatory bowel disease
  • recurrent sinopulmonary infections
Tags
Green Green List (high evidence)
BCL10
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 37, MIM# 616098
Tags
Green Green List (high evidence)
BCL11B
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 49, MIM# 617237
  • Intellectual developmental disorder with dysmorphic facies, speech delay, and T-cell abnormalities, MIM# 618092
Tags
Green Green List (high evidence)
BLM
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Bloom Syndrome MIM# 210900
  • Short stature, dysmorphic facies
  • sun-sensitive
  • immunoglobulin deficiency (IgA, IgG, IgM)
  • erythema
  • marrow failure
  • leukaemia
  • lymphoma
  • chromosomal instability
  • predisposition to malignancies
Tags
Green Green List (high evidence)
BLNK
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Agammaglobulinaemia 4, MIM# 613502
Tags
  • treatable
Green Green List (high evidence)
BLOC1S6
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Hermansky-Pudlak syndrome 9, MIM# 614171
Tags
Green Green List (high evidence)
BTK
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Agammaglobulinaemia, X-linked 1, MIM# 300755
  • Isolated growth hormone deficiency, type III, with agammaglobulinaemia, MIM# 307200
Tags
  • treatable
Green Green List (high evidence)
BTK
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
C17orf62
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Expert list
Phenotypes
  • Chronic granulomatous disease 5, autosomal recessive, MIM# 618935
Tags
  • new gene name
Green Green List (high evidence)
C1QA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • C1q deficiency, MIM# 613652
Tags
Green Green List (high evidence)
C1QB
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • C1q deficiency, MIM# 613652
Tags
Green Green List (high evidence)
C1QC
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • C1q deficiency MIM#613652
Tags
Green Green List (high evidence)
C1R
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
C1S
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • C1s deficiency MIM#613783
Tags
Green Green List (high evidence)
C2
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
C2orf69
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Combined oxidative phosphorylation deficiency-53 (COXPD53), MIM#619423
Tags
Green Green List (high evidence)
C3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • C3 deficiency MIM#613779
Tags
Green Green List (high evidence)
C5
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • C5 deficiency MIM#609536
Tags
Green Green List (high evidence)
C6
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • C6 deficiency MIM#612446
Tags
  • treatable
Green Green List (high evidence)
C7
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • C7 deficiency MIM#610102
Tags
Green Green List (high evidence)
C8B
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • C8 deficiency, type II MIM#613789
Tags
Green Green List (high evidence)
C9
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • C9 deficiency MIM#613825
Tags
Green Green List (high evidence)
CARD11
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 11A, autosomal recessive, MIM# 615206
  • Immunodeficiency 11B with atopic dermatitis, autosomal dominant, MIM# 617638
Tags
Green Green List (high evidence)
CARD11
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
CARD14
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Psoriasis 2, MIM# 602723
Tags
Green Green List (high evidence)
CARD9
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Candidiasis, familial, 2, autosomal recessive, MIM# 212050
  • Predisposition to invasive fungal disease, MONDO:0008905
Tags
Green Green List (high evidence)
CARD9
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Candidiasis, familial, 2, autosomal recessive, MIM# 212050
  • Predisposition to invasive fungal disease, MONDO:0008905
Tags
Green Green List (high evidence)
CARMIL2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • Early onset paediatric inflammatory bowel disease
Tags
Green Green List (high evidence)
CARMIL2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 58, MIM# 618131
Tags
Green Green List (high evidence)
CASP10
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Autoimmune lymphoproliferative syndrome, type II MIM#603909
Tags
Green Green List (high evidence)
CBLB
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoimmune disease, multisystem, infantile-onset, 3, MIM# 620430
Tags
Green Green List (high evidence)
CCBE1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Hennekam lymphangiectasia- lymphoedema syndrome MIM# 235510
  • lymphangiectasia and lymphoedema
  • facial abnormalities
  • dysmorphic features
  • hypoalbuminaemia
  • intellectual disability
  • hypoglobulinaemia
Tags
Green Green List (high evidence)
CCR5
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • {Hepatitis C virus, resistance to} 609532
  • {HIV infection, susceptibility/resistance to}
  • {West nile virus, susceptibility to}MIM# 610379
Tags
Green Green List (high evidence)
CD19
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 3, MIM# 613493
Tags
Green Green List (high evidence)
CD19
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 3, MIM#613493
Tags
Green Green List (high evidence)
CD247
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 25, MIM# 610163
  • Absent T cells
  • Normal B cells
  • Normal NK cells
Tags
Green Green List (high evidence)
CD27
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Lymphoproliferative syndrome 2
  • CD27-deficiency MIM# 615122
  • hepatosplenomegaly
  • reduced CD8+ T-cell function
  • lymphadenopathy
  • hepatosplenomegaly
  • fever
  • increased susceptibility to EBV infection
  • aplastic anaemia
Tags
Green Green List (high evidence)
CD27
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Lymphoproliferative syndrome 2
  • CD27-deficiency MIM# 615122
  • hepatosplenomegaly
  • reduced CD8+ T-cell function
  • lymphadenopathy
  • hepatosplenomegaly
  • fever
  • increased susceptibility to EBV infection
  • aplastic anaemia
Tags
Green Green List (high evidence)
CD27
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Lymphoproliferative syndrome 2, MIM# 615122
Tags
Green Green List (high evidence)
CD27
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Lymphoproliferative syndrome 2, MIM# 615122
  • Host response to EBV
Tags
Green Green List (high evidence)
CD3D
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 19 MIM# 615617
Tags
  • treatable
Green Green List (high evidence)
CD3E
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 18 MIM# 615615
Tags
  • treatable
Green Green List (high evidence)
CD3G
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 17, CD3 gamma deficient MIM# 615607
  • immune deficiency
  • autoimmunity
  • failure to thrive
  • recurrent gastrointestinal infections
  • recurrent respiratory infections
  • autoimmune haemolytic anaemia
  • Bronchiolitis obliterans
  • low CD3 complex
  • partial T lymphocytopenia
  • intractable diarrhoea.
Tags
Green Green List (high evidence)
CD3G
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
CD4
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 79, MIM# 619238
  • Absence of CD4+ T cells
  • exuberant, relapsing, treatment-refractory warts
Tags
Green Green List (high evidence)
CD40
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency with hyper-IgM, type 3, MIM# 606843
Tags
  • treatable
Green Green List (high evidence)
CD40LG
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, X-linked, with hyper-IgM MIM# 308230
  • Severe opportunistic infections (recurrent), idiopathic neutropaenia
  • dysgammaglobulinaemia hepatitis
  • cholangitis
  • cholangiocarcinoma
  • autoimmune blood cytopenias
  • haemolytic anaemia
  • thrombocytopaenia
  • diarrhoea
  • peripheral neuroectodermal tumours
Tags
  • treatable
Green Green List (high evidence)
CD40LG
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
CD46
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
CD55
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Complement hyperactivation, angiopathic thrombosis, and protein-losing enteropathy, MIM# 226300
Tags
Green Green List (high evidence)
CD59
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
CD70
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Lymphoproliferative syndrome 3, MIM# 618261
  • Host response to EBV
Tags
  • treatable
Green Green List (high evidence)
CD70
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Lymphoproliferative syndrome 3, MIM# 618261
Tags
  • treatable
Green Green List (high evidence)
CD79A
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Agammaglobulinaemia 3, MIM#613501
Tags
  • treatable
Green Green List (high evidence)
CD79B
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Agammaglobulinaemia 6, MIM# 612692
Tags
  • treatable
Green Green List (high evidence)
CD81
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 6, MIM# 613496
Tags
Green Green List (high evidence)
CD81
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 6, MIM# 613496
Tags
Green Green List (high evidence)
CDC42
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Neonatal-onset cytopaenia with dyshaematopoiesis
  • autoinflammation
  • rash
  • HLH
Tags
Green Green List (high evidence)
CDCA7
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency-centromeric instability-facial anomalies syndrome 3, MIM# 616910
Tags
Green Green List (high evidence)
CEBPE
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Specific granule deficiency, MIM# 245480
Tags
Green Green List (high evidence)
CFD
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
CFH
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
CFI
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
CFP
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
CFTR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Cystic fibrosis, MIM# 219700
Tags
Green Green List (high evidence)
CHD7
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • CHARGE syndrome MIM# 214800
  • Hypogonadotropic hypogonadism 5 with or without anosmia MIM# 612370
  • Kallmann syndrome
  • hypogonadotropic hypogonadism with or without anosmia (HH)
  • Coloboma of the eye
  • heart anomaly
  • choanal atresia
  • intellectual disability
  • genital and ear anomalies, Deafness
  • Delayed pubertal development
  • CNS malformation
  • Cleft lip
  • SCID-like features
  • lymphopaenia
  • sever T-cell deficiency
  • hypogammaglobulinaemia
Tags
Green Green List (high evidence)
CIB1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Epidermodysplasia verruciformis 3 618267
  • HPV infections and cancer of the skin
Tags
Green Green List (high evidence)
CIB1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Epidermodysplasia verruciformis 3, MIM# 618267
  • HPV infections and cancer of the skin
Tags
Green Green List (high evidence)
CIITA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Bare Lymphocyte Syndrome, type II, complementation group A MIM# 209920
  • varied ID
  • bronchiolitis
  • pneumonia
  • severe autoimmune cytopaenia
  • CD4 T-cell lymphopaenia
  • hypogammaglobulinemia
  • absence of antigen-induced immune response
  • chronic diarrhoea
  • recurrent respiratory infections
  • recurrent gastroenteritis
  • failure to thrive
  • liver/biliary tract disease
Tags
Green Green List (high evidence)
CLCN7
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Osteopetrosis, autosomal recessive 4 MIM#611490
Tags
Green Green List (high evidence)
CLPB
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • 3-methylglutaconic aciduria, type VII, with cataracts, neurologic involvement and neutropaenia, MIM# 616271
  • Neutropenia, severe congenital, 9, autosomal dominant, MIM# 619813
Tags
Green Green List (high evidence)
COL4A3BP
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Intellectual developmental disorder 34 (MIM#616351)
Tags
  • new gene name
Green Green List (high evidence)
COPA
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Autoimmune interstitial lung, joint, and kidney disease, MIM 616414
Tags
Green Green List (high evidence)
CORO1A
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 8, MIM# 615401
Tags
  • treatable
Green Green List (high evidence)
CR2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 7, MIM# 614699
Tags
Green Green List (high evidence)
CR2
3 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 7, MIM# 614699
Tags
Green Green List (high evidence)
CSF2RA
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Surfactant metabolism dysfunction, pulmonary, 4 MIM#300770
Tags
Green Green List (high evidence)
CSF2RB
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Surfactant metabolism dysfunction, pulmonary, 5 MIM#614370
Tags
Green Green List (high evidence)
CSF3R
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Neutropaenia, severe congenital, 7, autosomal recessive, MIM# 617014
Tags
Green Green List (high evidence)
CTLA4
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Autoimmune lymphoproliferative syndrome, type V, MIM# 616100
Tags
Green Green List (high evidence)
CTLA4
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Autoimmune lymphoproliferative syndrome, type V, MIM# 616100
Tags
Green Green List (high evidence)
CTLA4
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
CTPS1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 24, MIM# 615897
  • Recurrent/chronic bacterial and viral infections (EBV, VZV)
  • EBV lymphoproliferation
  • B-cell non-Hodgkin lymphoma
Tags
Green Green List (high evidence)
CTPS1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 24, MIM# 615897
  • Recurrent/chronic bacterial and viral infections (EBV, VZV)
  • EBV lymphoproliferation
  • B-cell non-Hodgkin lymphoma
Tags
Green Green List (high evidence)
CTSC
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Papillon-Lefevre syndrome, MIM# 245000
Tags
Green Green List (high evidence)
CXCR2
2 reviews
1 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • WHIM syndrome 2 619407
Tags
Green Green List (high evidence)
CXCR4
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • WHIM syndrome, MIM# 193670
Tags
Green Green List (high evidence)
CXCR4
1 review
1 green
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
CXCR4
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
CXCR4
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • WHIM syndrome 1, MIM# 193670
Tags
Green Green List (high evidence)
CXCR4
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • WHIM syndrome 1, MIM# 193670
Tags
Green Green List (high evidence)
CYBA
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
CYBA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Chronic granulomatous disease 4, autosomal recessive, MIM# 233690
  • MONDO:0009308
Tags
Green Green List (high evidence)
CYBB
1 review
1 green
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
CYBB
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Chronic granulomatous disease, X-linked, MIM# 306400
Tags
Green Green List (high evidence)
CYBB
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Chronic granulomatous disease, X-linked, MIM# 306400
Tags
Green Green List (high evidence)
CYBB
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
DBR1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • {Encephalitis, acute, infection (viral)-induced, susceptibility to, 11}, MIM# 619441
  • Viral infections of the brainstem
Tags
Green Green List (high evidence)
DCLRE1C
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Severe combined immunodeficiency, Athabascan type MIM# 602450
  • Absent/reduced T and B cells
  • decreased Ig levels
  • Normal NK cell number
  • increased risk of graft rejection possibly due to activated NK cells
  • radiation sensitivity
  • failure to thrive
  • recurrent respiratory infections
  • diarrhoea
  • fever
  • hypogammmaglobulinaemia
Tags
Green Green List (high evidence)
DCLRE1C
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Severe combined immunodeficiency, Athabascan type MIM# 602450
  • Omenn syndrome MIM# 603554
Tags
Green Green List (high evidence)
DCLRE1C
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
DDX58
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Lupus Nephritis, MONDO:0005556, DDX58-related
Tags
Green Green List (high evidence)
DEF6
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 87 and autoimmunity, MIM# 619573
  • Systemic autoimmunity
Tags
Green Green List (high evidence)
DIAPH1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Seizures, cortical blindness, microcephaly syndrome, MIM# 616632
  • Combined Immune deficiency
Tags
Green Green List (high evidence)
DKC1
3 reviews
2 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • Dyskeratosis congenita, X-linked, MIM# 305000
Tags
Green Green List (high evidence)
DKC1
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyskeratosis congenita, X-linked MIM# 305000
  • Bone marrow failure, pulmonary & hepatic fibrosis, nail dystrophy, leukoplakia, reticulate skin pigmentation
  • microcephaly, immunodeficiency
  • aplastic anaemia
  • thrombocytopaenia
  • neurodevelopmental delay
  • cerebellar hypoplasia
  • opportunistic infections
Tags
Green Green List (high evidence)
DNAJC21
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Bone marrow failure syndrome 3, MIM# 617052
  • Short stature
  • Exocrine pancreatic insufficiency
  • Pancytopaenia
  • Shwachman-Diamond syndrome
Tags
Green Green List (high evidence)
DNASE1L3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Systemic lupus erythematosus 16, MIM# 614420
Tags
Green Green List (high evidence)
DNASE2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Autoinflammatory-pancytopaenia syndrome, MIM# 619858
Tags
Green Green List (high evidence)
DNMT3B
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency-centromeric instability-facial anomalies syndrome 1 MIM# 242860
  • facial dysmorphic features
  • flat nasal bridge
  • developmental delay
  • macroglossia
  • bacterial/opportunistic infections (recurrent)
  • malabsorption
  • cytopaenia
  • malignancies
  • multiradial configurations of chromosomes 1, 9, 16
  • Hypogammaglobulinaemia
  • agammaglobulinaemia
  • variable antibody deficiency
  • decreased immunoglobulin production
  • low T/B/NK cells
Tags
  • treatable
Green Green List (high evidence)
DNMT3B
1 review
1 green
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
  • treatable
Green Green List (high evidence)
DOCK11
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoimmune disease with immune dysregulation, X-linked (ADMIDX), MIM#301109
Tags
Green Green List (high evidence)
DOCK11
2 reviews
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoimmune disease with immune dysregulation, X-linked (ADMIDX), MIM#301109
  • Inflammatory bowel disease
Tags
Green Green List (high evidence)
DOCK2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 40 MIM# 616433
  • T/B-cell lymphopaenia
  • early-onset invasive herpes/viral/bacterial Infections
  • function defects in T/B/NK cells
  • immunodeficiency
  • defective IFN-mediated immunity
  • elevated IgM
  • normal IgG/IgA levels
Tags
Green Green List (high evidence)
DOCK8
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Australian Genomics Health Alliance Immunology Flagship
Phenotypes
  • Hyper-IgE recurrent infection syndrome, autosomal recessive MIM# 243700
  • T cell Lymphopaenia
  • decraese T/B/NK cells
  • Eosinophilia
  • low IgM
  • elevated IgE
  • recurrent cutaneous/ viral/ bacterial/ fungal/ infections
  • severe atopy/allergic disease
  • autoimmune haemolytic anaemia
  • eczema
  • cancer diathesis
Tags
  • treatable
Green Green List (high evidence)
DOCK8
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
DOCK8
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Hyper-IgE recurrent infection syndrome, autosomal recessive MIM# 243700
  • T cell Lymphopaenia
  • decraese T/B/NK cells
  • Eosinophilia
  • low IgM
  • elevated IgE
  • recurrent cutaneous/ viral/ bacterial/ fungal/ infections
  • severe atopy/allergic disease
  • autoimmune haemolytic anaemia
  • eczema
  • cancer diathesis
Tags
Green Green List (high evidence)
DPP9
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammatory syndrome MONDO:0019751, DPP9-related
  • recurrent fevers
  • repeated infections
  • herpes susceptibility
  • cytopaenias
Tags
Green Green List (high evidence)
DSG1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Other
Phenotypes
  • Erythroderma, congenital, with palmoplantar keratoderma, hypotrichosis, and hyper IgE MIM#615508
Tags
Green Green List (high evidence)
DUOX2
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Inflammatory bowel disease, MONDO:0005265, DUOX2-related
Tags
Green Green List (high evidence)
EFL1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Shwachman-Diamond syndrome 2, MIM# 617941
Tags
Green Green List (high evidence)
ELANE
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Neutropaenia, severe congenital 1, autosomal dominant, MIM# 202700
  • Neutropaenia, cyclic, MIM# 162800
Tags
Green Green List (high evidence)
ELANE
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Neutropenia, cyclic MIM#162800
Tags
Green Green List (high evidence)
ELF4
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Other
Phenotypes
  • Autoinflammatory syndrome, familial, X-linked, Behcet-like 2 (MIM#301074)
Tags
Green Green List (high evidence)
EPG5
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Vici syndrome, MIM# 242840
Tags
Green Green List (high evidence)
ERCC6L2
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Bone marrow failure syndrome 2, MIM# 615715
Tags
Green Green List (high evidence)
EXTL3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunoskeletal dysplasia with neurodevelopmental abnormalities, MIM# 617425
Tags
Green Green List (high evidence)
F12
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Angioedema, hereditary, 3, MIM# 610618
Tags
  • founder
Green Green List (high evidence)
FADD
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • FADD-related immunodeficiency MONDO:0013408
Tags
Green Green List (high evidence)
FAS
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
FASLG
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • autoimmune lymphoproliferative syndrome MONDO:0017979
Tags
Green Green List (high evidence)
FAT4
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Hennekam lymphangiectasia-lymphedema syndrome 2, MIM# 616006
  • Low/variable T and B cells
  • Lymphangiectasia and lymphedema with facial abnormalities and other dysmorphic features
Tags
Green Green List (high evidence)
FCHO1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 76, MIM# 619164
  • Combined immunodeficiency
  • T cells: low, poor proliferation
  • B cells: normal number
  • Recurrent infections (viral, mycobacteria, bacterial, fungal)
  • lymphoproliferation
  • Failure to thrive
  • Increased activation-induced T-cell death
  • Defective clathrin-mediated endocytosis
Tags
Green Green List (high evidence)
FERMT3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Leukocyte adhesion deficiency, type III, MIM# 612840
Tags
Green Green List (high evidence)
FNIP1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 93 and hypertrophic cardiomyopathy, MIM# 619705
Tags
Green Green List (high evidence)
FNIP1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Hypertrophic Cardiomyopathy
  • Primary Immunodeficiency
  • Agammaglobulinemia
  • Neutropenia
  • Immunodeficiency 93 and hypertrophic cardiomyopathy, MIM# 619705
Tags
Green Green List (high evidence)
FOXN1
2 reviews
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • T-cell immunodeficiency, congenital alopecia, and nail dystrophy, autosomal recessive MIM# 601705
  • T-cell lymphopenia, infantile, with or without nail dystrophy, autosomal dominan, MIM#t 618806
Tags
Green Green List (high evidence)
FOXN1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • T-cell immunodeficiency, congenital alopecia, and nail dystrophy, autosomal recessive MIM# 601705
  • T-cell lymphopenia, infantile, with or without nail dystrophy, autosomal dominan, MIM#t 618806
Tags
Green Green List (high evidence)
FOXP3
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
FOXP3
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
  • treatable
Green Green List (high evidence)
G6PC3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Neutropaenia, severe congenital 4, autosomal recessive, MIM# 612541
  • MONDO:0012930
  • Dursun syndrome, MIM# 612541
Tags
Green Green List (high evidence)
G6PC3
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
G6PD
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Hemolytic anemia, G6PD deficient (favism), MIM# 300908
Tags
Green Green List (high evidence)
GATA2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • GATA2 deficiency with susceptibility to MDS/AML (MONDO:0042982)
Tags
  • treatable
Green Green List (high evidence)
GATA2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Emberger syndrome, MIM# 614038
Tags
Green Green List (high evidence)
GFI1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Neutropaenia, severe congenital 2, autosomal dominant, MIM# 613107
Tags
  • treatable
Green Green List (high evidence)
GIMAP6
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammatory syndrome MONDO:0019751, GIMAP6-related
Tags
Green Green List (high evidence)
GINS1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 55, MIM#617827
Tags
Green Green List (high evidence)
GUCY2C
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
HAVCR2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • T-cell lymphoma, subcutaneous panniculitis-like, MIM# 618398
Tags
Green Green List (high evidence)
HAVCR2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • T-cell lymphoma, subcutaneous panniculitis-like, MIM# 618398
Tags
Green Green List (high evidence)
HAX1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Neutropaenia, severe congenital 3, autosomal recessive, MIM# 610738
  • Kostmann syndrome MONDO:0012548
Tags
Green Green List (high evidence)
HELLS
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency-centromeric instability-facial anomalies syndrome 4, MIM#616911
Tags
Green Green List (high evidence)
HMOX1
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Heme oxygenase-1 deficiency, MIM# 614034
  • Asplenia
Tags
Green Green List (high evidence)
HPS1
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
HPS4
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
HPS6
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
HTRA2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • 3-methylglutaconic aciduria, type VIII, MIM# 617248
Tags
Green Green List (high evidence)
HYOU1
3 reviews
1 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 59 and hypoglycemia, MIM# 233600
Tags
Green Green List (high evidence)
ICOS
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 1 MIM# 607594
  • recurrent bacterial respiratory/gastrointestinal infections
  • autoimmunity
  • gastroenteritis
  • low IgG/IgA
  • normal-low IgM
  • hypogammaglobulinaemia
  • low-normal B-cells
  • normal T-cells
  • Bronchitis
  • Lymphadenopathy
  • Hepatomegaly
  • Diarrhoea
Tags
  • SV/CNV
Green Green List (high evidence)
ICOS
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 1 MIM# 607594
  • recurrent bacterial respiratory/gastrointestinal infections
  • autoimmunity
  • gastroenteritis
  • low IgG/IgA
  • normal-low IgM
  • hypogammaglobulinaemia
  • low-normal B-cells
  • normal T-cells
  • Bronchitis
  • Lymphadenopathy
  • Hepatomegaly
  • Diarrhoea
Tags
Green Green List (high evidence)
ICOS
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
IFIH1
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
IFIH1
1 review
1 green
BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Inflammatory Bowel Disease
Tags
Green Green List (high evidence)
IFIH1
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Severe viral respiratory infections
  • Rhinovirus and other RNA viruses
Tags
Green Green List (high evidence)
IFIH1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Aicardi-Goutieres syndrome 7, MIM# 615846
Tags
Green Green List (high evidence)
IFNAR1
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 106, susceptibility to viral infections, MIM# 619935
  • Severe disease caused by Yellow Fever vaccine and Measles vaccine
Tags
Green Green List (high evidence)
IFNAR2
2 reviews
1 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 45, MIM# 616669
Tags
Green Green List (high evidence)
IFNGR1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 27A, mycobacteriosis, AR, MIM# 209950
  • Immunodeficiency 27B, mycobacteriosis, AD, MIM# 615978
Tags
Green Green List (high evidence)
IFNGR1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 27A, mycobacteriosis, AR, MIM# 209950
  • Immunodeficiency 27B, mycobacteriosis, AD, MIM# 615978
Tags
Green Green List (high evidence)
IFNGR2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 28, mycobacteriosis, MIM# 614889
Tags
Green Green List (high evidence)
IFNGR2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 28, mycobacteriosis, MIM# 614889
Tags
Green Green List (high evidence)
IGHM
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Agammaglobulinemia 1, MIM# 601495
Tags
Green Green List (high evidence)
IGLL1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Agammaglobulinaemia 2, MIM# 613500
Tags
Green Green List (high evidence)
IKBKB
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 15A, autosomal dominant, MIM# 618204
  • Immunodeficiency 15B, autosomal recessive, MIM# 615592
Tags
Green Green List (high evidence)
IKBKG
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
IKBKG
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Ectodermal dysplasia and immunodeficiency 1 MIM# 300291
  • Immunodeficiency 33 MIM# 300636
Tags
Green Green List (high evidence)
IKBKG
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Autoinflammatory disease, systemic, X-linked, MIM# 301081
Tags
Green Green List (high evidence)
IKZF1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 13 MIM# 616873
  • recurrent bacterial respiratory infections
  • Thrombocytopaenia
  • immunodeficiency
  • Hypogammaglobulinaemia
  • decrease B-cells
  • decrease B-cell differentiation
  • decrease memory B/T cells
  • Low Ig
  • pneumocystis early CID onset
Tags
Green Green List (high evidence)
IKZF1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immune dysregulation
Tags
Green Green List (high evidence)
IKZF1
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 13 MIM# 616873
  • recurrent bacterial respiratory infections
  • Thrombocytopaenia
  • immunodeficiency
  • Hypogammaglobulinaemia
  • decrease B-cells
  • decrease B-cell differentiation
  • decrease memory B/T cells
  • Low Ig
  • pneumocystis early CID onset
Tags
Green Green List (high evidence)
IKZF1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency, common variable, 13, MIM# 616873
  • Low IgG, IgA, IgM, low or normal B cells
  • B cells and Ig levels reduce with age
  • Decreased pro-B cells
  • Recurrent sinopulmonary infections
  • Increased risk of ALL, autoimmunity
Tags
Green Green List (high evidence)
IKZF2
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency, MONDO:0021094, IKZF2-related
  • Immune dysregulation
Tags
Green Green List (high evidence)
IKZF3
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 84, MIM# 619437
Tags
Green Green List (high evidence)
IL10
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • Diseases of Immune Dysregulation
  • Early-onset inflammatory bowel disease
Tags
Green Green List (high evidence)
IL10
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
IL10RA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Inflammatory bowel disease 28, early onset, autosomal recessive, MIM# 613148
Tags
Green Green List (high evidence)
IL10RA
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
IL10RB
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
IL10RB
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Inflammatory bowel disease 25, early onset, autosomal recessive, MIM# 612567
Tags
Green Green List (high evidence)
IL12B
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 29, mycobacteriosis, MIM# 614890
Tags
Green Green List (high evidence)
IL12B
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 29, mycobacteriosis, MIM# 614890
Tags
Green Green List (high evidence)
IL12RB1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 30, MIM# 614891
Tags
Green Green List (high evidence)
IL12RB1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 30, MIM# 614891
Tags
Green Green List (high evidence)
IL17RA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 51, MIM# 613953
  • MONDO:0013500
Tags
Green Green List (high evidence)
IL17RA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 51, MIM# 613953
  • MONDO:0013500
Tags
Green Green List (high evidence)
IL17RC
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Candidiasis, familial, 9, MIM# 616445
  • MONDO:0014642
Tags
Green Green List (high evidence)
IL17RC
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Candidiasis, familial, 9, MIM# 616445
  • MONDO:0014642
Tags
Green Green List (high evidence)
IL1RN
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Interleukin 1 receptor antagonist deficiency, MIM# 612852
Tags
Green Green List (high evidence)
IL21R
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 56, MIM# 615207
Tags
Green Green List (high evidence)
IL23R
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Inherited susceptibility to mycobacterial disease, MONDO:0019146, IL23R-related
Tags
Green Green List (high evidence)
IL23R
2 reviews
1 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency disease, MONDO:0021094
  • Susceptibility to mycobacteria and Salmonella
Tags
Green Green List (high evidence)
IL2RA
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
IL2RA
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
IL2RB
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 63 with lymphoproliferation and autoimmunity, MIM# 618495
  • Lymphoproliferation, lymphadenopathy, hepatosplenomegaly, autoimmune haemolytic anaemia, dermatitis, enteropathy, hypergammaglobulinaemia, recurrent viral (EBV, CMV) infections
Tags
  • treatable
Green Green List (high evidence)
IL2RB
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • Immunodeficiency 63 with lymphoproliferation and autoimmunity, MIM# 618495
Tags
Green Green List (high evidence)
IL2RG
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
IL2RG
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Combined immunodeficiency, X-linked, moderate MIM# 312863
  • Severe combined immunodeficiency, X-linked MIM# 300400
  • recurrent viral/fungal/bacterial infections
  • Low T/NK cells
  • Low Ig levels
  • lymphocytopaenia
  • hypogammaglobulinaemia
  • failure to thrive
  • diarrhoea
  • Pneumonia
  • Thymic hypoplasia
Tags
Green Green List (high evidence)
IL2RG
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Combined immunodeficiency, X-linked, moderate MIM# 312863
  • Severe combined immunodeficiency, X-linked MIM# 300400
  • recurrent viral/fungal/bacterial infections
  • Low T/NK cells
  • Low Ig levels
  • lymphocytopaenia
  • hypogammaglobulinaemia
  • failure to thrive
  • diarrhoea
  • Pneumonia
  • Thymic hypoplasia
Tags
Green Green List (high evidence)
IL36RN
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Psoriasis 14, pustular, MIM# 614204
  • Autoinflammatory syndrome, MONDO:0019751, IL36RN-related
Tags
Green Green List (high evidence)
IL6ST
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Hyper-IgE recurrent infection syndrome 4A, autosomal dominant , MIM#619752
  • Hyper-IgE recurrent infection syndrome 4B, autosomal recessive, MIM# 618523
Tags
Green Green List (high evidence)
IL6ST
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Hyper-IgE recurrent infection syndrome 4, autosomal recessive, MIM# 618523
  • Stuve-Wiedemann syndrome 2, MIM# 619751: skeletal dysplasia, neonatal lung dysfunction, thrombocytopenia, dermatitis, defective acute-phase response
  • Hyper-IgE syndrome, autosomal dominant
Tags
Green Green List (high evidence)
IL7R
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Severe combined immunodeficiency, T-cell negative, B-cell/natural killer cell-positive type MIM# 608971
  • low T-cell numbers
  • normal-high B and NK-cell numbers
  • fever
  • rash
  • failure to thrive
  • recurrent respiratory and gastric infections
  • Hepatomegaly
  • Splenomegaly
  • diarrhoea
  • lymphadenopathy
  • pneumonitis
  • Pancytopaenia
  • decreased immunoglobulins
Tags
Green Green List (high evidence)
IL7R
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Severe combined immunodeficiency, T-cell negative, B-cell/natural killer cell-positive type MIM# 608971
  • fever
  • rash
  • failure to thrive
  • recurrent respiratory and gastric infections
  • diarrhoea
  • lymphadenopathy
  • pneumonitis
  • Pancytopaenia
  • low T-cell numbers
  • decreased immunoglobulins
  • normal-high B/NK-cell numbers.
Tags
Green Green List (high evidence)
IPO8
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Vascular aneurysm, immune dysregulation, skeletal anomalies, and skin and joint laxity, MIM# 619472
  • Loeys-Dietz syndrome-like
  • cardiovascular, neurologic, skeletal and immunologic abnormalities
Tags
Green Green List (high evidence)
IRAK4
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 67, MIM# 607676
Tags
Green Green List (high evidence)
IRAK4
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammatory syndrome, MONDO:0019751, IRAK4-related
Tags
Green Green List (high evidence)
IRF1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 117, mycobacteriosis, autosomal recessive, MIM# 620668
Tags
Green Green List (high evidence)
IRF2BP2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency, common variable, 14, MIM# 617765
Tags
Green Green List (high evidence)
IRF2BP2
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency, common variable, 14 MIM#617765
Tags
Green Green List (high evidence)
IRF4
2 reviews
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Other
Phenotypes
  • Combined immunodeficiency, MONDO:0015131, IRF4-related
Tags
Green Green List (high evidence)
IRF7
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 39, MIM# 616345
Tags
Green Green List (high evidence)
IRF7
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 39, MIM# 616345
Tags
Green Green List (high evidence)
IRF8
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 32A, mycobacteriosis, autosomal dominant, MIM# 614893
  • Immunodeficiency 32B, monocyte and dendritic cell deficiency, autosomal recessive, MIM# 226990
Tags
Green Green List (high evidence)
IRF8
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 32A, mycobacteriosis, autosomal dominant, MIM# 614893
  • Immunodeficiency 32B, monocyte and dendritic cell deficiency, autosomal recessive, MIM# 226990
Tags
Green Green List (high evidence)
ISG15
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 38, MIM# 616126
Tags
Green Green List (high evidence)
ISG15
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 38, MIM# 616126
Tags
Green Green List (high evidence)
ITCH
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
ITGB2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Leukocyte adhesion deficiency, MIM# 116920
Tags
Green Green List (high evidence)
ITGB2
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
ITK
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Lymphoproliferative syndrome 1 MIM# 613011
  • Lymphadenopathy
  • Recurrent infections
  • Hypogammaglobulinaemia
  • Evidence of EBV infection
  • EBV associated B cell Lymphoproliferation
  • High EBV viral load
  • Normal-low serum Ig
  • Depleted CD4+ T cells
  • Anaemia
  • Thrombocytopaenia
  • Hepatosplenomegaly
Tags
Green Green List (high evidence)
ITK
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Lymphoproliferative syndrome 1, MIM# 613011
  • EBV- associated B cell lymphoproliferation, lymphoma
Tags
Green Green List (high evidence)
ITK
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Lymphoproliferative syndrome 1, MIM# 613011
  • EBV associated B call lymphoproliferation, lymphoma
Tags
Green Green List (high evidence)
IVNS1ABP
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 70, MIM#618969
Tags
Green Green List (high evidence)
JAGN1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Neutropaenia, severe congenital, 6, autosomal recessive, MIM# 616022
Tags
Green Green List (high evidence)
JAK1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Eosinophilia
  • Eosinophilic enteritis
  • Thyroid disease
  • Poor growth
  • Viral infections
  • Viral infections
  • Autoinflammation, immunde dysregulation, and eosinophilia, MIM# 618999
Tags
Green Green List (high evidence)
JAK1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammation, immunde dysregulation, and eosinophilia, MIM# 618999
Tags
Green Green List (high evidence)
JAK3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • SCID, autosomal recessive, T-negative/B-positive type MIM# 600802
Tags
  • treatable
Green Green List (high evidence)
KDM6A
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Kabuki syndrome 2 MIM#300867
Tags
Green Green List (high evidence)
KMT2D
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Kabuki syndrome 1 MIM#147920
Tags
Green Green List (high evidence)
LACC1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Juvenile arthritis MIM#618795
Tags
Green Green List (high evidence)
LAT
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 52, MIM# 617514
Tags
Green Green List (high evidence)
LCK
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 22 MIM# 615758
  • Recurrent infections
  • Immune dysregulation
  • autoimmunity
  • Low CD4+
  • low CD8+
  • restricted T cell repertoire
  • poor TCR signaling
  • Normal IgG/IgA
  • high IgM
  • failure to thrive
  • diarrhoea
  • lymphopenia
  • hypogammaglobulinemia
  • anaemia
  • thrombocytopaenia
  • CD4+ T-cell lymphopenia
Tags
Green Green List (high evidence)
LCP2
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 81, MIM# 619374
Tags
Green Green List (high evidence)
LIG1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Combined immunodeficiency
  • Lymphopaenia
  • Hypogammaglobulinaemia
  • Recurrent bacterial and viral infections
  • Growth retardation
  • Sun sensitivity, radiation sensitivity
  • Macrocytosis
Tags
Green Green List (high evidence)
LIG1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 96, MIM# 619774
Tags
Green Green List (high evidence)
LIG4
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • LIG4 syndrome, MIM# 606593
  • Immune dysregulation
Tags
Green Green List (high evidence)
LIG4
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • LIG4 syndrome MIM# 606593
  • T-/B-lymphocytopaenia
  • Normal NK, radiation sensitivity
  • Microcephaly
  • absent/low B and T cells
  • low Ig
  • raised IgM
  • failure to thrive
  • bacterial/viral/fungal infections
  • hypogammaglobulinaemia
  • neurodevelopmental delay
  • microcephaly
  • pancytopaenia
Tags
  • treatable
Green Green List (high evidence)
LIG4
3 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • LIG4 syndrome MIM# 606593
  • T-/B- lymphocytopaenia
  • Normal NK, radiation sensitivity
  • Microcephaly
  • low B/C cells
  • low Ig
  • raised IgM
  • failure to thrive
  • bacterial/viral/fungal infections
  • hypogammaglobulinaemia
  • neurodevelopmental delay
  • microcephaly
  • pancytopaenia
Tags
  • treatable
Green Green List (high evidence)
LIG4
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • LIG4 syndrome, MIM# 606593
Tags
Green Green List (high evidence)
LPIN2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Majeed syndrome, MIM# 609628
  • Chronic recurrent multifocal osteomyelitis with congenital dyserythropoietic anaemia
Tags
Green Green List (high evidence)
LRBA
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
LRBA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency, common variable, 8, with autoimmunity MIM#614700
Tags
Green Green List (high evidence)
LRBA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 8, with autoimmunity MIM# 614700
  • Normal-decreased CD4 numbers
  • T cell dysregulation
  • Low-normal B cells
  • Reduced IgG and IgA
  • Recurrent infections
  • chronic diarrhoea
  • inflammatory bowel disease
  • hypogammaglobulinaemia
  • pneumonitis
  • autoimmune disorders
  • thrombocytopaenia
Tags
Green Green List (high evidence)
LRBA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency, common variable, 8, with autoimmunity, MIM# 614700
  • Recurrent infections
  • Inflammatory bowel disease
  • Autoimmunity
  • EBV infections
Tags
Green Green List (high evidence)
LYN
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammatory disease, systemic, with vasculitis, MIM# 620376
Tags
Green Green List (high evidence)
LYST
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
  • treatable
Green Green List (high evidence)
MAGT1
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, X-linked, with magnesium defect, Epstein-Barr virus infection and neoplasia MIM# 300853
  • XMEN
  • Low CD4
  • inverted CD4/CD8 ratio
  • reduced MAIT cells
  • poor proliferation to CD3
  • decreased memory B cells
  • progressive hypogammaglobulinaemia
  • reduced NK cell
  • EBV infection
  • lymphoma
  • viral infections
  • respiratory and GI infections
  • Glycosylation defects
Tags
Green Green List (high evidence)
MAGT1
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency, X-linked, with magnesium defect, Epstein-Barr virus infection and neoplasia, MIM# 300853
Tags
Green Green List (high evidence)
MAGT1
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency, X-linked, with magnesium defect, Epstein-Barr virus infection and neoplasia, MIM# 300853
Tags
Green Green List (high evidence)
MALT1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 12 MIM# 615468
  • poor T-cell proliferation
  • normal T/B cell numbers
  • poor specific antibody response
  • recurrent bacterial/fungal/viral infections
  • bronchiectasis
  • failure to thrive
Tags
Green Green List (high evidence)
MAP3K14
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 112, MIM# 620449
  • NIK deficiency
  • Poor T cell proliferation to antigen
  • Low B-cell numbers
  • Low NK number and function
  • recurrent bacterial/viral/ cryptosporidium infections
  • hypogammaglobulinaemia
  • decreased immunoglobulin levels
Tags
Green Green List (high evidence)
MAP3K14
1 review
1 green
Unknown
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 112, MIM# 620449
Tags
Green Green List (high evidence)
MCTS1
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 118, mycobacteriosis, MIM# 301115
Tags
Green Green List (high evidence)
MEFV
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Familial Mediterranean fever, AD, MIM# 134610
  • Familial Mediterranean fever, AR, MIM# 249100
  • Neutrophilic dermatosis, MIM#608068
Tags
Green Green List (high evidence)
MEFV
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
MOGS
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Congenital disorder of glycosylation, type IIb, MIM# 606056
  • Severe hypogammaglobulinaemia
  • Bacterial and viral infections
  • Severe neurologic disease
Tags
Green Green List (high evidence)
MOGS
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Congenital disorder of glycosylation, type IIb, MIM# 606056
Tags
Green Green List (high evidence)
MOGS
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Congenital disorder of glycosylation, type IIb MIM#606056
  • Mannosyl-oligosaccharide glucosidase deficiency (MOGS)
Tags
Green Green List (high evidence)
MPEG1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 77, MIM# 619223
Tags
Green Green List (high evidence)
MSN
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 50, MIM# 300988
Tags
Green Green List (high evidence)
MSN
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 50, MIM# 300988
Tags
Green Green List (high evidence)
MSN
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
  • Expert list
Phenotypes
  • Immunodeficiency 50, MIM# 300988
Tags
Green Green List (high evidence)
MTHFD1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Combined immunodeficiency and megaloblastic anemia with or without hyperhomocysteinaemia MIM # 617780
  • Decreased Ig levels
  • poor antibody responses to conjugated polysaccharide antigens
  • low B/T/NK cells
  • Recurrent bacterial infection
  • megaloblastic anaemia
  • failure to thrive
  • neutropenia
  • seizures
  • intellectual disability
  • folate-responsive
  • Lymphopaenia
Tags
Green Green List (high evidence)
MVK
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Hyper-IgD syndrome (MIM#260920)
  • Mevalonic aciduria (MIM#610377)
Tags
Green Green List (high evidence)
MVK
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
MYD88
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 68, MIM# 612260
Tags
Green Green List (high evidence)
MYSM1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Bone marrow failure syndrome 4, MIM#618116
Tags
  • treatable
Green Green List (high evidence)
NBAS
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Haemophagocytic lymphohistiocytosis (HLH), MONDO:0015541
Tags
Green Green List (high evidence)
NBAS
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Short stature, optic nerve atrophy, and Pelger-Huet anomaly MIM#614800
  • Infantile liver failure syndrome 2 MIM#616483
Tags
Green Green List (high evidence)
NBN
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Nijmegen breakage syndrome, MIM#251260
Tags
Green Green List (high evidence)
NCF1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Chronic granulomatous disease 1, autosomal recessive, MIM# 233700
Tags
Green Green List (high evidence)
NCF1
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
NCF2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Chronic granulomatous disease 2, autosomal recessive, MIM# 233710
Tags
Green Green List (high evidence)
NCF2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Chronic granulomatous disease 2, autosomal recessive, MIM# 233710
Tags
Green Green List (high evidence)
NCF4
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Granulomatous disease, chronic, autosomal recessive, cytochrome b-positive, type III MIM#613960
Tags
Green Green List (high evidence)
NCKAP1L
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency
  • Immune dysregulation
  • Immunodeficiency 72 with autoinflammation, MIM# 618982
Tags
Green Green List (high evidence)
NCSTN
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Acne inversa, familial, 1 MIM#142690
Tags
Green Green List (high evidence)
NFE2L2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency, developmental delay, and hypohomocysteinemia, MIM# 617744
  • Recurrent respiratory and skin infection
  • Growth retardation
  • Developmental delay, borderline ID
  • White matter cerebral lesions
Tags
Green Green List (high evidence)
NFKB1
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 12 MIM# 616576
  • Normal-low IgG, IgA, IgM
  • low-normal B cells
  • low switched memory B cells
  • hypogammaglobulinaemia
  • recurrent respiratory and gastrointestinal infections
  • Chronic obstructive pulmonary disease COPD
  • EBV proliferation
  • autoimmunity
  • alopecia
Tags
Green Green List (high evidence)
NFKB1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 12 MIM# 616576
  • Normal-low IgG, IgA, IgM
  • low-normal B cells
  • low switched memory B cells
  • hypogammaglobulinaemia
  • recurrent respiratory and gastrointestinal infections
  • Chronic obstructive pulmonary disease COPD
  • EBV proliferation
  • autoimmunity
  • alopecia
Tags
Green Green List (high evidence)
NFKB1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 12 MIM# 616576
  • Normal-low IgG, IgA, IgM
  • low-normal B cells
  • low switched memory B cells
  • hypogammaglobulinaemia
  • recurrent respiratory and gastrointestinal infections
  • Chronic obstructive pulmonary disease COPD
  • EBV proliferation
  • autoimmunity
  • alopecia
Tags
Green Green List (high evidence)
NFKB2
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 10 MIM# 615577
  • Low serum IgG, IgA, IgM
  • low B cell numbers
  • low switched memory B cells
  • Recurrent sinopulmonary infections, Alopecia
  • endocrinopathies
  • ACTH deficiency
Tags
Green Green List (high evidence)
NFKB2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 10 MIM# 615577
  • Low serum IgG, IgA, IgM
  • low B cell numbers
  • low switched memory B cells
  • Recurrent sinopulmonary infections, Alopecia
  • endocrinopathies
  • ACTH deficiency
Tags
Green Green List (high evidence)
NFKB2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 10 MIM# 615577
  • Low serum IgG, IgA, IgM
  • low B cell numbers
  • low switched memory B cells
  • Recurrent sinopulmonary infections, Alopecia
  • endocrinopathies
  • ACTH deficiency
Tags
Green Green List (high evidence)
NFKBIA
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Ectodermal dysplasia and immunodeficiency 2 MIM# 612132
  • Ectodermal dysplasia
  • TCR/ BCR activation impaired
  • low memory and isotype switched B cells
  • decreased IgG and IgA
  • elevated IgM
  • poor specific antibody responses
  • diarrhoea
  • agammaglobulinaemia
  • ectodermal dysplasia
  • recurrent respiratory and gastrointestinal infections
  • colitis
  • variable defects of skin, hair and teeth
Tags
Green Green List (high evidence)
NHEJ1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Severe combined immunodeficiency with microcephaly, growth retardation, and sensitivity to ionizing radiation, MIM# 611291
  • MONDO:0012650
Tags
Green Green List (high evidence)
NHP2
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyskeratosis congenita, autosomal recessive 2 MIM# 613987
  • Shortened telomeres
  • Leukoplakia
  • Nail dystrophy
  • Bone marrow failure
  • Pancytopaenia
  • reticulate skin pigmentation
  • Thrombocytopaenia
  • recurrent opportunistic infections
Tags
Green Green List (high evidence)
NLRC4
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Familial cold autoinflammatory syndrome 4 - MIM#616115
  • Autoinflammation with infantile enterocolitis - MIM#616050
Tags
Green Green List (high evidence)
NLRP1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Autoinflammation with arthritis and dyskeratosis, MIM# 617388
  • Palmoplantar carcinoma, multiple self-healing 615225
  • Recurrent respiratory papillomatosis
Tags
Green Green List (high evidence)
NLRP12
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Familial cold autoinflammatory syndrome 2 - MIM#611762
Tags
Green Green List (high evidence)
NLRP3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Familial cold inflammatory syndrome 1, MIM# 120100
  • Deafness, autosomal dominant 34, with or without inflammation, MIM# 617772
  • CINCA syndrome, MIM#12032915 607115
Tags
Green Green List (high evidence)
NOD2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Blau syndrome, MIM# 186580
Tags
Green Green List (high evidence)
NOD2
2 reviews
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • {Inflammatory bowel disease 1, Crohn disease} 266600
  • {Yao syndrome} 617321
Tags
Green Green List (high evidence)
OAS1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 100 with pulmonary alveolar proteinosis and hypogammaglobulinaemia, MIM#618042
Tags
Green Green List (high evidence)
OAS1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 100 with pulmonary alveolar proteinosis and hypogammaglobulinaemia, MIM#618042
Tags
Green Green List (high evidence)
ORAI1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 9, MIM# 612782
Tags
Green Green List (high evidence)
OSTM1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Osteopetrosis, autosomal recessive 5 MIM#259720
Tags
Green Green List (high evidence)
OTULIN
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Autoinflammation, panniculitis, and dermatosis syndrome, MIM# 617099
Tags
Green Green List (high evidence)
OTULIN
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Autoinflammation, panniculitis, and dermatosis syndrome, MIM# 617099
Tags
Green Green List (high evidence)
OTULIN
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 107, susceptibility to invasive staphylococcus aureus infection, MIM# 619986
Tags
Green Green List (high evidence)
PARN
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyskeratosis congenita, autosomal recessive 6, MIM# 616353
Tags
Green Green List (high evidence)
PAX1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Syndromic SCID
  • dysmorphism
  • ear abnormalities
  • Otofaciocervical syndrome 2, MIM# 615560
Tags
Green Green List (high evidence)
PEPD
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Prolidase deficiency, MIM#170100
Tags
Green Green List (high evidence)
PGM3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 23, MIM# 615816
  • PGM3-CDG, MONDO:0014353
Tags
Green Green List (high evidence)
PGM3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Australian Genomics Health Alliance Immunology Flagship
Phenotypes
  • Immunodeficiency 23, MIM# 615816
  • PGM3-CDG, MONDO:0014353
Tags
Green Green List (high evidence)
PIK3CD
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 14, MIM# 615513
Tags
Green Green List (high evidence)
PIK3CD
2 reviews
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 14B, autosomal recessive, MIM# 619281
  • Immunodeficiency 14A, autosomal dominant, MIM# 615513
Tags
Green Green List (high evidence)
PIK3CD
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
PIK3CG
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 97 with autoinflammation, MIM# 619802
  • Immune dysregulation
  • HLH-like
  • childhood-onset antibody defects
  • cytopenias
  • T lymphocytic pneumonitis and colitis
Tags
Green Green List (high evidence)
PIK3R1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 36 MIM#616005
Tags
Green Green List (high evidence)
PIK3R1
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
PLCG2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Autoinflammation, antibody deficiency, and immune dysregulation syndrome MIM#614878
Tags
Green Green List (high evidence)
PLCG2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Hereditary susceptibility to infections, MONDO:0015979, PLCG2-related
  • Susceptibility to herpes virus
Tags
Green Green List (high evidence)
PLCG2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Common variable immunodeficiency
  • Autoinflammation, antibody deficiency, and immune dysregulation syndrome MIM#614878
Tags
Green Green List (high evidence)
PLEKHM1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Osteopetrosis, autosomal recessive 6 MIM#611497
Tags
Green Green List (high evidence)
PLG
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Hereditary angioedema-4 (HAE4), MIM#619360
Tags
Green Green List (high evidence)
PNP
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency due to purine nucleoside phosphorylase deficiency MIM# 613179
  • Autoimmune hemolytic anaemia
  • neurological impairment
  • SCID
  • CID
  • hypouricaemia
  • failure to thrive
  • chronic diarrhoea
  • recurrent respiratory/ gastrointestinal infections
  • normal-low Ig levels
  • spastic paresis
  • tremor
  • ataxia
  • DD
Tags
Green Green List (high evidence)
POLA1
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Pigmentary disorder, reticulate, with systemic manifestations, X-linked, MIM# 301220
Tags
  • deep intronic
Green Green List (high evidence)
POLD1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 120, MIM# 620836
  • Low CD4 T cells
  • Low B cells, normal maturation
  • recurrent respiratory tract infections, skin infections, warts and molluscum
  • short stature
  • intellectual disability
Tags
Green Green List (high evidence)
POLD3
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 122, MIM# 620869
Tags
Green Green List (high evidence)
POLE
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • FILS syndrome, MIM# 615139
  • IMAGE-I syndrome, MIM# 618336
Tags
  • deep intronic
Green Green List (high evidence)
POMP
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Combined immunodeficiency
  • Autoinflammation
Tags
Green Green List (high evidence)
PRF1
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
PRKCD
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Autoimmune lymphoproliferative syndrome, type III, MIM# 615559
  • CVID 9
Tags
Green Green List (high evidence)
PRKCD
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Autoimmune lymphoproliferative syndrome, type III, MIM# 615559
  • CVID 9
Tags
Green Green List (high evidence)
PRKDC
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 26, with or without neurologic abnormalities MIM# 615966
  • Absent T and B cells
  • normal NK cells
  • SCID
  • recurrent respiratory infections
  • microcephaly
  • seizures
  • developmental delay
Tags
Green Green List (high evidence)
PSEN1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • ?Acne inversa, familial, 3 MIM#613737
Tags
Green Green List (high evidence)
PSENEN
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Acne inversa, familial, 2, with or without Dowling-Degos disease MIM#613736
Tags
Green Green List (high evidence)
PSMB10
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Severe combined immunodeficiency, MONDO:0015974, PSMB10-related
Tags
Green Green List (high evidence)
PSMB10
2 reviews
1 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Proteasome-associated autoinflammatory syndrome 5, MIM# 619175
Tags
Green Green List (high evidence)
PSMB8
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Proteasome-associated autoinflammatory syndrome 1, MIM# 256040
  • MONDO:0054698
Tags
Green Green List (high evidence)
PSMB9
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Proteasome-associated autoinflammatory syndrome 3, digenic, MIM# 617591
  • Proteasome-associated autoinflammatory syndrome 6, MIM# 620796
Tags
Green Green List (high evidence)
PSTPIP1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Pyogenic sterile arthritis, pyoderma gangrenosum, and acne, MIM# 604416
  • PSTPIP1-associated myeloid-related proteinemia inflammatory (PAMI) syndrome
Tags
Green Green List (high evidence)
PTCRA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammatory syndrome, MONDO:0019751, PTCRA-related
Tags
Green Green List (high evidence)
PTEN
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Macrocephaly/autism syndrome MIM#605309
  • Cowden syndrome 1 MIM#158350
  • Skewed immune repertoire composition
Tags
Green Green List (high evidence)
PTPRC
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Severe combined immunodeficiency, T cell-negative, B-cell/natural killer-cell positive MIM# 608971
  • Hepatitis C virus, susceptibility to MIM# 609532
Tags
Green Green List (high evidence)
RAB27A
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Griscelli syndrome, type 2, MIM# 607624
Tags
Green Green List (high evidence)
RAC2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Neutrophil immunodeficiency syndrome, MIM# 608203
  • Common variable immunodeficiency
Tags
Green Green List (high evidence)
RAC2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • SCID
  • recurrent bacterial and viral infections
  • lymphoproliferation
  • neutropaenia
  • reticular dysgenesis
  • deafness
Tags
Green Green List (high evidence)
RAC2
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 73A with defective neutrophil chemotaxix and leukocytosis MIM# 608203
  • Immunodeficiency 73C with defective neutrophil chemotaxis and hypogammaglobulinaemia MIM# 618987
  • Immunodeficiency 73B with defective neutrophil chemotaxis and lymphopaenia MIM# 618986
Tags
Green Green List (high evidence)
RAC2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • SCID
  • recurrent bacterial and viral infections
  • lymphoproliferation
  • neutropaenia
  • reticular dysgenesis
  • deafness
  • selective IgA deficiency
  • Reduced Ab responses following vaccination
Tags
Green Green List (high evidence)
RAD50
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Nijmegen breakage syndrome-like disorder, MIM# 613078
  • Hypogammaglobulinaemia
Tags
Green Green List (high evidence)
RAG1
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
RAG1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Alpha/beta T-cell lymphopenia with gamma/delta T-cell expansion, severe cytomegalovirus infection, and autoimmunity MIM# 609889
  • Combined cellular and humoral immune defects with granulomas MIM# 233650
  • Omenn syndrome MIM# 603554
  • Severe combined immunodeficiency, B cell-negative MIM# 601457
Tags
Green Green List (high evidence)
RAG1
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Severe combined immunodeficiency, B cell-negative (MIM#601457)
Tags
Green Green List (high evidence)
RAG2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Severe combined immunodeficiency, B cell-negative (MIM#601457)
Tags
Green Green List (high evidence)
RAG2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Omenn syndrome MIM# 603554
  • Severe combined immunodeficiency, B cell-negative MIM# 601457
  • Combined cellular and humoral immune defects with granulomas MIM# 233650
Tags
Green Green List (high evidence)
RAG2
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
RANBP2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • {Encephalopathy, acute, infection-induced, 3, susceptibility to} MIM#608033
Tags
Green Green List (high evidence)
RASGRP1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 64, MIM#618534
Tags
Green Green List (high evidence)
RBCK1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Polyglucosan body myopathy 1 with or without immunodeficiency MIM# 615895
  • muscular weakness
  • cardiomyopathy
  • recurrent bacterial/viral infections
  • autoinflammation
  • immunodeficiency
  • Poor antibody responses to polysaccharides
  • failure to thrive
  • fever
  • pneumonia
Tags
Green Green List (high evidence)
RBCK1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Polyglucosan body myopathy 1 with or without immunodeficiency MIM# 615895
  • muscular weakness
  • cardiomyopathy
  • recurrent bacterial/viral infections
  • autoinflammation
  • immunodeficiency
  • Poor antibody responses to polysaccharides
  • failure to thrive
  • fever
  • pneumonia
Tags
Green Green List (high evidence)
RELA
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Mucocutaneous ulceration, chronic, MIM# 618287
  • Inflammatory bowel disease
Tags
Green Green List (high evidence)
RELA
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Mucocutaneous ulceration, chronic, MIM# 618287
  • Impaired NFkB activation
  • reduced production of inflammatory cytokines
  • autoimmune cytopaenias
Tags
Green Green List (high evidence)
RELA
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Mucocutaneous ulceration, chronic, MIM# 618287
  • periodic fever, inflammatory bowel disease, JIA
Tags
Green Green List (high evidence)
RFX5
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Bare lymphocyte syndrome, type II, complementation group C MIM# 209920
  • Bare lymphocyte syndrome, type II, complementation group E MIM# 209920
Tags
Green Green List (high evidence)
RFXANK
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • MHC class II deficiency, complementation group B MIM# 209920
  • Bare Lymphocyte Syndrome, type II, complementation group B
  • Low CD4+ T cells
  • reduced MHC II expression on lymphocytes
  • Normal-low Ig levels
  • Failure to thrive
  • respiratory/gastrointestinal infections
  • liver/biliary tract disease
  • diarrhoea
  • Severe autoimmune cytopaenia
  • agammaglobulinaemia
Tags
  • founder
Green Green List (high evidence)
RFXAP
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Bare lymphocyte syndrome, type II, complementation group D MIM# 209920
  • Low CD4+ T cells
  • reduced MHC II expression on lymphocytes
  • Normal-low Ig levels
  • Failure to thrive
  • respiratory/gastrointestinal infections
  • liver/biliary tract disease
  • diarrhoea
  • Severe autoimmune cytopaenia
  • agammaglobulinaemia
Tags
Green Green List (high evidence)
RHBDF2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Pneumonia
  • Colitis
  • Immunodeficiency
Tags
Green Green List (high evidence)
RIPK1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 57, MIM#618108
Tags
Green Green List (high evidence)
RIPK1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 57, MIM#618108
Tags
Green Green List (high evidence)
RMRP
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Cartilage hair hypoplasia (CHH) MIM#250250
  • shortened limbs
  • short stature
  • metaphysical dysplasia
  • fine, sparse and/or light-coloured hair
  • hematologic abnormalities
  • CID
  • impaired lymphocyte proliferation
  • low Ig levels
  • antibodies variably decreased
  • bone marrow failure
  • autoimmunity
  • susceptibility to lymphoma and other cancers
  • impaired spermatogenesis
  • neuronal dysplasia of the intestine
Tags
Green Green List (high evidence)
RNASEH2A
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Aicardi-Goutieres syndrome 4, MIM# 610333
Tags
Green Green List (high evidence)
RNASEH2A
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
RNASEH2B
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Aicardi-Goutieres syndrome 2, MIM# 610181
Tags
Green Green List (high evidence)
RNASEH2B
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
RNASEH2C
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Aicardi-Goutieres syndrome 3, MIM# 610329
Tags
Green Green List (high evidence)
RNASEH2C
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
RNF168
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • RIDDLE syndrome MIM# 611943
  • Radiosensitivity
  • Immune Deficiency
  • Dysmorphic Features
  • Learning difficulties
  • Low IgG or IgA
  • Short stature
  • mild defect of motor control to ataxia
  • normal intelligence to learning difficulties
  • mild facial dysmorphism to microcephaly
Tags
Green Green List (high evidence)
RNU4ATAC
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Lowry-Wood syndrome MIM#226960
  • Microcephalic osteodysplastic primordial dwarfism, type I MIM#210710
  • Roifman syndrome MIM#616651
Tags
Green Green List (high evidence)
RNU7-1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Other
Phenotypes
  • Aicardi-Goutieres syndrome 9 (MIM#619487)
Tags
Green Green List (high evidence)
RORC
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 42, MIM# 616622
Tags
Green Green List (high evidence)
RORC
1 review
1 green
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
RORC
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 42, MIM# 616622
  • Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency, MONDO:0014710
Tags
Green Green List (high evidence)
RPSA
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Asplenia, isolated congenital, MIM# 271400
Tags
Green Green List (high evidence)
RTEL1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyskeratosis congenita, autosomal dominant 4 MIM# 615190
  • Dyskeratosis congenita, autosomal recessive 5 MIM# 615190
  • Pulmonary fibrosis and/or bone marrow failure, telomere-related, 3 MIM# 616373
Tags
Green Green List (high evidence)
RTEL1
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
SAMD9
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • MIRAGE syndrome, MIM# 617053
Tags
Green Green List (high evidence)
SAMHD1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Aicardi-Goutieres syndrome 5, MIM# 612952
Tags
Green Green List (high evidence)
SAMHD1
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
SASH3
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 102, MIM# 301082
Tags
Green Green List (high evidence)
SASH3
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 102, MIM# 301082
Tags
Green Green List (high evidence)
SAT1
2 reviews
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Systemic lupus erythematosus, MONDO:0007915, SAT1-related
Tags
Green Green List (high evidence)
SBDS
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Shwachman-Diamond syndrome, MIM# 260400
Tags
Green Green List (high evidence)
SEC61A1
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency, common variable, 15, MIM# 620670
Tags
Green Green List (high evidence)
SEC61A1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
  • Expert list
Phenotypes
  • Hyperuricemic nephropathy, familial juvenile, 4, MIM# 617056
  • Neutropenia, severe congenital, 11, autosomal dominant, MIM# 620674
  • Immunodeficiency, common variable, 15, MIM# 620670
Tags
Green Green List (high evidence)
SEC61A1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Hyperuricemic nephropathy, familial juvenile, 4, MIM# 617056
  • Immunodeficiency, common variable, 15, MIM# 620670
Tags
Green Green List (high evidence)
SENP7
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Arthrogryposis multiplex congenita, MONDO:0015168, SENP7-related
Tags
Green Green List (high evidence)
SENP7
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Arthrogryposis multiplex congenita, MONDO:0015168, SENP7-related
Tags
Green Green List (high evidence)
SERPINA1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • Emphysema-cirrhosis, due to AAT deficiency, MIM# 613490
Tags
Green Green List (high evidence)
SERPING1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Angioedema, hereditary, 1 and 2, MIM# 106100
Tags
Green Green List (high evidence)
SERPING1
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
SGPL1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
  • Expert Review
Phenotypes
  • Sphingosine Phosphate Lyase Insufficiency Syndrome
  • Nephrotic syndrome, type 14, MIM#617575
Tags
Green Green List (high evidence)
SH2D1A
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
SH2D1A
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Host response to EBV infection
  • Lymphoproliferative syndrome, X-linked, 1 308240
Tags
Green Green List (high evidence)
SH2D1A
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
SH2D1A
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
SHARPIN
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammation with episodic fever and immune dysregulation, MIM# 620795
Tags
Green Green List (high evidence)
SKIV2L
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
SKIV2L
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Trichohepatoenteric syndrome 2, MIM#614602
Tags
Green Green List (high evidence)
SKIV2L
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Trichohepatoenteric syndrome 2, MIM# 614602
  • Respiratory infections
  • IUGR
  • Facial dysmorphic features
  • Wooly hair
  • Early-onset intractable diarrhoea
  • Liver cirrhosis
  • Platelet abnormalities
Tags
Green Green List (high evidence)
SLC29A3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Histiocytosis-lymphadenopathy plus syndrome, MIM# 602782
Tags
Green Green List (high evidence)
SLC35C1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Congenital disorder of glycosylation, type IIc, MIM# 266265, MONDO:0009953
Tags
Green Green List (high evidence)
SLC37A4
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
SLC37A4
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Glycogen storage disease Ib, MIM# 232220
Tags
Green Green List (high evidence)
SLC39A7
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Agammaglobulinaemia 9, autosomal recessive, MIM# 619693
  • Antibody deficiency
  • early onset infections
  • blistering dermatosis
  • failure to thrive
  • thrombocytopaenia
Tags
Green Green List (high evidence)
SLC46A1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Folate malabsorption, hereditary MIM# 229050
  • Decreased Ig levels
  • megaloblastic anaemia
  • failure to thrive
  • Immunodeficiency
  • if untreated for prolonged periods results in intellectual disability
  • oral mucositis
  • hypoimmunoglobulinaemia
  • recurrent infections
  • seizures
  • motor impairment
  • leukopaenia
  • thrombocytopaenia
Tags
  • founder
Green Green List (high evidence)
SLC7A7
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Lysinuric protein intolerance, MIM# 222700
  • Hyper-inflammatory response of macrophages
  • Normal NK cell function
  • Lysinuric protein intolerance
  • Bleeding tendency
  • Alverolar proteinosis
Tags
Green Green List (high evidence)
SLCO2A1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Inflammatory bowel disease, MONDO:0005265, SLCO2A1-related
  • Enteropathy
Tags
Green Green List (high evidence)
SMARCAL1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Schimke immune-osseous dysplasia MIM# 242900
  • T cell deficiency
  • Short stature
  • spondyloepiphyseal dysplasia
  • renal dysfunction
  • lymphocytopaenia
  • nephropathy
  • bacterial/viral/fungal infections
  • may present as SCID
  • bone marrow failure
Tags
Green Green List (high evidence)
SMARCD2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Specific granule deficiency 2, MIM# 617475
  • Neutropaenia
  • Neurodevelopmental abnormalities in some
  • Myelodysplasia
Tags
Green Green List (high evidence)
SNORA31
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • {Encephalopathy, acute, infection-induced (herpes-specific), susceptibility to, 1}, MIM# 619396
Tags
Green Green List (high evidence)
SNX10
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Osteopetrosis, autosomal recessive 8 MIM#615085
Tags
Green Green List (high evidence)
SOCS1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammatory syndrome, familial, with or without immunodeficiency, MIM# 619375
  • Enteropathy
Tags
Green Green List (high evidence)
SOCS1
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammatory syndrome, familial, with or without immunodeficiency, MIM# 619375
  • Early-onset autoimmunity
Tags
Green Green List (high evidence)
SOCS1
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammatory syndrome, familial, with or without immunodeficiency, MIM# 619375
  • Common variable immunodeficiency
Tags
Green Green List (high evidence)
SP110
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
SP110
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Hepatic veno-occlusive disease with immunodeficiency MIM#235550
  • Hepatic veno-occlusive disease
  • susceptibility to Pneumocystis jirovecii pneumonia
  • cytomegalovirus
  • thrombocytopaenia
  • hepatosplenomegaly
  • cerebrospinal leukodystrophy
  • memory T/B cell deficiency
  • low Ig levels
  • absent tissue plasma cells
  • absent lymph node germinal centers
  • hypogammaglobulinaemia
Tags
  • founder
Green Green List (high evidence)
SPI1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Agammaglobulinaemia 10, autosomal dominant, MIM# 619707
Tags
Green Green List (high evidence)
SPINK5
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Australian Genomics Health Alliance Immunology Flagship
Phenotypes
  • Netherton syndrome, MIM# 256500
Tags
Green Green List (high evidence)
SPINK5
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Netherton syndrome MIM# 256500
  • Low switched and non-switched B cells
  • High IgE and IgA
  • Antibody variably decreased
  • Congenital ichthyosis
  • bamboo hair
  • atopic diathesis
  • increased bacterial infections
  • failure to thrive
  • food allergies
Tags
Green Green List (high evidence)
SRP54
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Neutropenia, severe congenital, 8, autosomal dominant, MIM# 618752
Tags
Green Green List (high evidence)
STAT1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 31B, mycobacterial and viral infections, autosomal recessive, MIM# 613796
Tags
Green Green List (high evidence)
STAT1
1 review
1 green
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
STAT1
1 review
1 green
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
STAT1
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
STAT1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 31C, autosomal dominant, MIM# 614162
  • Predisposition to Mucocutaneous Candidiasis
Tags
Green Green List (high evidence)
STAT2
1 review
1 green
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
STAT2
1 review
1 green
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
STAT2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammatory disorder
Tags
Green Green List (high evidence)
STAT3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Hyper-IgE recurrent infection syndrome MIM# 147060
  • Autoimmune disease, multisystem, infantile-onset, 1 MIM# 615952
Tags
Green Green List (high evidence)
STAT3
2 reviews
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Hyper-IgE recurrent infection syndrome , MIM#147060
  • Mucocutaneous candidiasis
Tags
Green Green List (high evidence)
STAT3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Autoimmune disease, multisystem, infantile-onset, 1 MIM# 615952
  • Lymphoproliferation
  • solid organ autoimmunity
  • recurrent infections
  • short stature
  • eczema
  • delayed puberty
  • dental abnormalities
  • autoimmune interstitial lung disease
  • juvenile-onset arthritis
  • primary hypothyroidism
Tags
Green Green List (high evidence)
STAT3
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
STAT3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Australian Genomics Health Alliance Immunology Flagship
Phenotypes
  • Hyper-IgE recurrent infection syndrome MIM# 147060
  • NKT cells decreased
  • Very high IgE, specific antibody production decreased
  • Distinctive facial features (broad nasal bridge)
  • bacterial infections
  • staphylococcal abscesses
  • eczema
  • mucocutaneous candidiasis
  • hyperextensible joints
  • osteoporosis and bone fractures
  • scoliosis
  • retained primary teeth
  • coronary and cerebral aneurysms
Tags
Green Green List (high evidence)
STAT4
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Disabling pansclerotic morphea of childhood MIM#620443
Tags
Green Green List (high evidence)
STAT5B
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Growth hormone insensitivity with immunodeficiency, MIM# 245590
Tags
  • somatic
Green Green List (high evidence)
STAT6
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Hyper-IgE syndrome 6, autosomal dominant, with atopy and allergies, MIM# 620532
Tags
Green Green List (high evidence)
STIM1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 10, MIM# 612783
Tags
Green Green List (high evidence)
STK4
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • T-cell immunodeficiency, recurrent infections, autoimmunity, and cardiac malformations MIM# 614868
  • CD4/CD8 lymphopaenia
  • cardiac malformations
  • reduced naïve T cells
  • increased TEM and TEMRA cells
  • poor T cell Proliferation
  • Reduced memory B cells
  • Reduced IgM, increased IgG, IgA, IgE
  • impaired antibody responses
  • intermittent neutropaenia
  • bacterial/ viral/ fungal infections
  • autoimmune cytopaenias
  • mucocutaneous candidiasis
  • cutaneous warts
Tags
Green Green List (high evidence)
STX11
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Haemophagocytic lymphohistiocytosis, familial, 4 , MIM#603552
Tags
Green Green List (high evidence)
STXBP2
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
STXBP2
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
STXBP3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Very Early Onset Inflammatory Bowel Disease
  • Bilateral Sensorineural Hearing Loss
  • Immune Dysregulation
Tags
Green Green List (high evidence)
STXBP3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Very Early Onset Inflammatory Bowel Disease
  • Bilateral Sensorineural Hearing Loss
  • Immune Dysregulation
Tags
Green Green List (high evidence)
SYK
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency-82 with systemic inflammation (IMD82) , MIM#619381
Tags
Green Green List (high evidence)
TAP1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Bare lymphocyte syndrome, type I MIM#604571
  • Low CD8
  • absent MHC I on lymphocytes
  • vasculitis
  • pyoderma gangrenosum
  • skin lesions
  • recurrent respiratory tract infections
  • bronchiectasis
Tags
Green Green List (high evidence)
TAP2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • MHC class I deficiency 2, MIM# 620813
  • Bare lymphocyte syndrome, type I, due to TAP2 deficiency MIM# 604571
  • Low CD8
  • absent MHC I on lymphocytes
  • Vasculitis
  • pyoderma gangrenosum
  • recurrent bacterial/viral respiratory infections
  • bronchiectasis
Tags
Green Green List (high evidence)
TAZ
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Barth syndrome, MIM# 302060
Tags
Green Green List (high evidence)
TBCE
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Hypoparathyroidism-retardation-dysmorphism syndrome, MIM# 241410
Tags
Green Green List (high evidence)
TBK1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency, MONDO:0021094, TBK1-related, AR
  • Autoinflammation
Tags
Green Green List (high evidence)
TBK1
1 review
1 green
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
TBK1
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Hereditary predisposition to infections, MONDO:0015979, TBK1-related
Tags
Green Green List (high evidence)
TBX1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • DiGeorge syndrome MIM# 188400
  • Velocardiofacial syndrome MIM# 192430
  • Decreased T cells
  • Hypoparathyroidism
  • Conotruncal cardiac malformation
  • velopalatal insufficiency
  • abnormal facies (cleft palate, prominent tubular nose etc)
  • intellectual disability
  • Immunodeficiency
  • thymic hypoplasia or aplasia with resultant T‐cell dysfunction
  • renal anomalies
  • autoimmunity
Tags
  • SV/CNV
Green Green List (high evidence)
TCF3
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Agammaglobulinaemia 8, autosomal dominant, MIM# 616941
  • Agammaglobulinaemia 8B, autosomal recessive, MIM# 619824
Tags
Green Green List (high evidence)
TCF3
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Agammaglobulinaemia 8, autosomal dominant, MIM# 616941
  • Agammaglobulinaemia 8B, autosomal recessive, MIM# 619824
Tags
Green Green List (high evidence)
TCIRG1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Osteopetrosis, autosomal recessive 1 MIM#259700
Tags
Green Green List (high evidence)
TCN2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Transcobalamin II deficiency MIM# 275350
  • Decreased Ig levels
  • Megaloblastic anaemia
  • pancytopaenia
  • if untreated (B12) for prolonged periods results in intellectual disability
  • failure to thrive
  • diarrhoea
  • hypogammaglobulinaemia
  • pallor
  • hypotonia
  • respiratory infection
Tags
Green Green List (high evidence)
TET2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immune dysregulation
  • Lymphoma
  • Immunodeficiency-75 (IMD75), MIM#619126
Tags
Green Green List (high evidence)
TGFBR1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Loeys-Dietz syndrome 1 MIM#609192
Tags
Green Green List (high evidence)
TGFBR1
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
TGFBR2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Loeys-Dietz syndrome 2 MIM#610168
Tags
Green Green List (high evidence)
TGFBR2
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
TICAM1
2 reviews
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • {Encephalopathy, acute, infection-induced (herpes-specific), susceptibility to, 6}, MIM# 614850
Tags
Green Green List (high evidence)
TICAM1
1 review
1 green
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
TLR3
1 review
1 green
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
TLR3
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • {Immunodeficiency 83, susceptibility to viral infections}, MIM# 613002
Tags
Green Green List (high evidence)
TLR7
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 74, COVID19-related, X-linked, MIM# 301051
Tags
Green Green List (high evidence)
TLR7
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Systemic lupus erythematosus 17, MIM# 301080
Tags
Green Green List (high evidence)
TLR8
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 98 with autoinflammation, X-linked, MIM# 301078
Tags
  • somatic
Green Green List (high evidence)
TLR8
2 reviews
1 green 1 red
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammatory syndrome MONDO:0019751, TLR8-associated
Tags
Green Green List (high evidence)
TMC6
1 review
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
TMC6
1 review
1 green
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
TMC8
1 review
1 green
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
TMC8
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Epidermodysplasia verruciformis 2, MIM# 618231
Tags
Green Green List (high evidence)
TMEM173
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • STING-associated vasculopathy, infantile-onset, MIM# 615934
Tags
Green Green List (high evidence)
TMEM173
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
TNFAIP3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Autoinflammatory syndrome, familial, Behcet-like, MIM# 616744
Tags
Green Green List (high evidence)
TNFAIP3
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Inflammatory bowel disease
  • Crohn's disease
  • Autoinflammatory syndrome, familial, Behcet-like
Tags
Green Green List (high evidence)
TNFRSF11A
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Osteopetrosis, autosomal recessive 7 MIM#612301
Tags
Green Green List (high evidence)
TNFRSF13B
2 reviews
1 green
Other
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 2, MIM# 240500
Tags
Green Green List (high evidence)
TNFRSF13B
1 review
1 green
Other
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 2, MIM# 240500
Tags
Green Green List (high evidence)
TNFRSF1A
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Periodic fever, familial, MIM# 142680
Tags
Green Green List (high evidence)
TNFRSF9
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Immunodeficiency 109 with lymphoproliferation, MIM# 620282
  • EBV lymphoproliferation
  • B-cell lymphoma
  • Chronic active EBV infection
Tags
Green Green List (high evidence)
TNFRSF9
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 109 with lymphoproliferation, MIM# 620282
Tags
Green Green List (high evidence)
TNFSF11
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Osteopetrosis, autosomal recessive 2 MIM#259710
Tags
Green Green List (high evidence)
TOP2B
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • B-cell immunodeficiency, distal limb anomalies, and urogenital malformations, MIM# 609296
  • Antibody deficiency
  • Recurrent infections
  • Facial dysmorphism
  • Limb anomalies
Tags
Green Green List (high evidence)
TPP2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 78 with autoimmunity and developmental delay, MIM# 619220
Tags
Green Green List (high evidence)
TRAF3
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammatory syndrome, TRAF3-related, MONDO:0019751
  • hypergammaglobulinemia
  • lymphadenopathy
  • splenomegaly, Sjögren’s syndrome
Tags
Green Green List (high evidence)
TREX1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • {Systemic lupus erythematosus, susceptibility to} 152700
  • Aicardi-Goutieres syndrome 1, dominant and recessive 225750
Tags
Green Green List (high evidence)
TREX1
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
TRIM22
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Inflammatory bowel disease
Tags
Green Green List (high evidence)
TRNT1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Sideroblastic anaemia with B-cell immunodeficiency, periodic fevers, and developmental delay, MIM# 616084
Tags
Green Green List (high evidence)
TRNT1
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Sideroblastic anemia with B-cell immunodeficiency, periodic fevers, and developmental delay MIM#616084
Tags
Green Green List (high evidence)
TRNT1
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
TTC37
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Trichohepatoenteric syndrome 1, MIM# 222470
  • Respiratory infections
  • IUGR
  • Facial dysmorphic features
  • Wooly hair:Early-onset intractable diarrhoea
  • Liver cirrhosis
  • Platelet abnormalities
Tags
Green Green List (high evidence)
TTC37
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Trichohepatoenteric syndrome 1, MIM# 222470
  • Respiratory infections
  • IUGR
  • Facial dysmorphic features
  • Wooly hair:Early-onset intractable diarrhoea
  • Liver cirrhosis
  • Platelet abnormalities
Tags
Green Green List (high evidence)
TTC37
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
TTC37
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Trichohepatoenteric syndrome 1, MIM#222470
  • Colitis
  • Pancolitis
  • Inflammatory bowel disease-like phenotype
  • Very Early Onset Inflammatory Bowel Disease
Tags
Green Green List (high evidence)
TTC7A
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • Gastrointestinal defects and immunodeficiency syndrome, 243150
  • Very Early Onset Inflammatory Bowel Disease (VEOIBD)
Tags
Green Green List (high evidence)
TTC7A
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Gastrointestinal defects and immunodeficiency syndrome, 243150
Tags
Green Green List (high evidence)
TYK2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 35, MIM# 611521
Tags
Green Green List (high evidence)
TYK2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 35, MIM# 611521
Tags
Green Green List (high evidence)
TYK2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Australian Genomics Health Alliance Immunology Flagship
Phenotypes
  • Immunodeficiency 35, MIM# 611521
Tags
Green Green List (high evidence)
UBA1
1 review
1 green
Other
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Autoinflammatory disease, adult onset
  • VEXAS syndrome (vacuoles, E1 enzyme, X-linked, autoinflammatory, somatic), MIM#301054
Tags
  • somatic
Green Green List (high evidence)
UNC13D
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Haemophagocytic lymphohistiocytosis, familial, 3 MIM#608898
Tags
  • treatable
Green Green List (high evidence)
UNG
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
USB1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Poikiloderma with neutropaenia, MIM# 604173
  • MONDO:0011405
Tags
Green Green List (high evidence)
USP18
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Pseudo-TORCH syndrome 2, MIM# 617397
Tags
Green Green List (high evidence)
VPS13B
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Cohen syndrome, MIM# 216550
Tags
Green Green List (high evidence)
VPS45
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Neutropaenia, severe congenital, 5, autosomal recessive, MIM# 615285
Tags
  • treatable
Green Green List (high evidence)
WAS
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Australian Genomics Health Alliance Immunology Flagship
Phenotypes
  • Thrombocytopaenia, X-linked, MIM# 313900
Tags
Green Green List (high evidence)
WAS
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Neutropaenia, severe congenital, X-linked, MIM# 300299
Tags
Green Green List (high evidence)
WAS
0 reviews
Unknown
Sources
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
WAS
0 reviews
Unknown
Sources
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Expert Review Green
Tags
Green Green List (high evidence)
WAS
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Neutropaenia, severe congenital, X-linked MIM# 300299
  • Wiskott-Aldrich syndrome MIM# 301000
  • Thrombocytopaenia, X-linked MIM# 313900
Tags
Green Green List (high evidence)
WDR1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Periodic fever, immunodeficiency, and thrombocytopenia syndrome, MIM#150550
Tags
Green Green List (high evidence)
WDR1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Periodic fever, immunodeficiency, and thrombocytopenia syndrome, MIM#150550
  • Neutropaenia
  • Poor wound healing
  • Severe stomatitis
  • Neutrophil nuclei herniate
  • Autoinflammatory periodic fever
  • Thrombocytopaenia
Tags
Green Green List (high evidence)
WIPF1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Wiskott-Aldrich syndrome 2 MIM# 614493
  • Reduced T cells
  • defective lymphocyte responses to anti-CD3
  • high IgE
  • Thrombocytopenia with or without small platelets
  • recurrent bacterial and viral Infections
  • eczema
  • bloody diarrhoea
  • gastrointestinal bleeding
  • WAS protein absent
Tags
Green Green List (high evidence)
WIPF1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Australian Genomics Health Alliance Immunology Flagship
Phenotypes
  • Wiskott-Aldrich syndrome 2 MIM# 614493
  • Reduced T cells
  • defective lymphocyte responses to anti-CD3
  • high IgE
  • Thrombocytopenia with or without small platelets
  • recurrent bacterial and viral Infections
  • eczema
  • bloody diarrhoea
  • gastrointestinal bleeding
  • WAS protein absent
Tags
Green Green List (high evidence)
WIPF1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Wiskott-Aldrich syndrome 2 MIM# 614493
  • Reduced T cells
  • defective lymphocyte responses to anti-CD3
  • high IgE
  • Thrombocytopenia with or without small platelets
  • recurrent bacterial and viral Infections
  • eczema
  • bloody diarrhoea
  • gastrointestinal bleeding
  • WAS protein absent
Tags
Green Green List (high evidence)
XIAP
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Lymphoproliferative syndrome, X-linked, 2, MIM# 300635
Tags
  • treatable
Green Green List (high evidence)
XIAP
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Lymphoproliferative syndrome, X-linked, 2 300635
  • Host response to EBV
Tags
Green Green List (high evidence)
XIAP
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Lymphoproliferative syndrome, X-linked, 2, MIM# 300635
Tags
Green Green List (high evidence)
XIAP
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Victorian Clinical Genetics Services
Phenotypes
  • X-linked lymphoproliferative syndrome 2
  • inflammatory bowel disease
  • colitis
Tags
Green Green List (high evidence)
ZAP70
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 48, MIM# 269840
  • Autoimmune disease, multisystem, infantile-onset, 2, MIM# 617006
Tags
Green Green List (high evidence)
ZAP70
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Autoimmune disease, multisystem, infantile-onset, 2 MIM#617006
Tags
Green Green List (high evidence)
ZBTB24
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency-centromeric instability-facial anomalies syndrome 2 MIM# 614069
  • Facial dysmorphic features
  • developmental delay
  • macroglossia
  • bacterial/opportunistic infections
  • malabsorption
  • cytopaenia
  • malignancies
  • multiradial configurations of chromosomes 1, 9, 16
  • Hypogammaglobulinaemia or agammaglobulinaemia
  • variable antibody deficiency
Tags
Green Green List (high evidence)
ZNF341
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • Hyper-IgE recurrent infection syndrome 3, autosomal recessive, MIM# 618282
  • Mild facial dysmorphism
  • Early onset eczema
  • Recurrent bacterial skin infections, abscesses
  • Recurrent respiratory infections, lung abscesses and pneumothoraces
  • Hyperextensible joints, bone fractures, retention of primary teeth
Tags
Green Green List (high evidence)
ZNF341
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert list
Phenotypes
  • Hyper-IgE recurrent infection syndrome 3, autosomal recessive, MIM# 618282
  • Mild facial dysmorphism
  • Early onset eczema
  • Recurrent bacterial skin infections, abscesses
  • Recurrent respiratory infections, lung abscesses and pneumothoraces
  • Hyperextensible joints, bone fractures, retention of primary teeth
Tags
Green Green List (high evidence)
ZNFX1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 91 and hyperinflammation, MIM# 619644
Tags
Green Green List (high evidence)
ZNFX1
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 91 and hyperinflammation, MIM# 619644
Tags
Green Green List (high evidence)
ZNFX1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Immunodeficiency 91 and hyperinflammation, MIM# 619644
Tags
Amber Amber List (moderate evidence)
ACTB
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Baraitser-Winter syndrome 1, MIM# 243310
Tags
Amber Amber List (moderate evidence)
ALPI
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Inflammatory bowel disease, MONDO:0005265, ALPI-related
Tags
Amber Amber List (moderate evidence)
ANGPT1
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Other
Phenotypes
  • Hereditary angioedema-5 (HAE5), MIM#619361
Tags
Amber Amber List (moderate evidence)
AP1S3
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • {Psoriasis 15, pustular, susceptibility to} 616106
Tags
Amber Amber List (moderate evidence)
ARHGEF1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Tags
Amber Amber List (moderate evidence)
BLK
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • common variable immunodeficiency
Tags
Amber Amber List (moderate evidence)
C17orf62
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert Review
Phenotypes
  • Chronic granulomatous disease
Tags
Amber Amber List (moderate evidence)
C4A
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • C4a deficiency MIM#614380
  • susceptibility systemic lupus erythematosus
Tags
  • for review
  • SV/CNV
Amber Amber List (moderate evidence)
C4B
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • susceptibility to autoimmune disease
  • C4B deficiency MIM#614379
Tags
  • SV/CNV
Amber Amber List (moderate evidence)
C8A
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • C8 deficiency, type I MIM#613790
Tags
Amber Amber List (moderate evidence)
CARD8
2 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Inflammatory bowel disease-30, MIM#619079
Tags
Amber Amber List (moderate evidence)
CASP8
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Autoimmune lymphoproliferative syndrome, type IIB MIM#607271
Tags
Amber Amber List (moderate evidence)
CD28
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Hereditary predisposition to infections, MONDO:0015979, CD28-related
  • isolated susceptibility to cutaneous α- and γ-HPVs
Tags
Amber Amber List (moderate evidence)
CD8A
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • CD8 deficiency, familial, MIM# 608957
Tags
Amber Amber List (moderate evidence)
CEBPE
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Immunodeficiency 108 with autoinflammation , MIM# 260570
Tags
Amber Amber List (moderate evidence)
CFB
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Complement factor B deficiency, MIM# 615561
Tags
Amber Amber List (moderate evidence)
CHUK
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Combined immunodeficiency, MONDO:0015131, CHUK-related
Tags
Amber Amber List (moderate evidence)
COPG1
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Combined immunodeficiency MONDO:0015131, COPG1-related
Tags
Amber Amber List (moderate evidence)
CTNNBL1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Immunodeficiency 99 with hypogammaglobulinemia and autoimmune cytopenias, MIM# 619846
Tags
Amber Amber List (moderate evidence)
DOCK2
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Genetic hemophagocytic lymphohistiocytosis MONDO:0015541
Tags
Amber Amber List (moderate evidence)
EPCAM
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Victorian Clinical Genetics Services
Phenotypes
  • Diarrhea 5, with tufting enteropathy, congenital, MIM# 613217
Tags
Amber Amber List (moderate evidence)
ERBIN
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Combined immunodeficiency, MONDO:0015131, ERBIN-related
  • Recurrent respiratory infections
  • Susceptibility to S.aureus
  • Eczema
  • Hyperextensible joints
  • Scoliosis
  • Arterial dilatation in some
Tags
Amber Amber List (moderate evidence)
FCGR3A
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 20, MIM# 615707
Tags
Amber Amber List (moderate evidence)
FCGR3A
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 20, MIM# 615707
Tags
Amber Amber List (moderate evidence)
FCN3
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency due to ficolin 3 deficiency, MIM# 613860
Tags
Amber Amber List (moderate evidence)
FGL2
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Autoinflammatory syndrome, MONDO:0019751, FGL2-related
Tags
Amber Amber List (moderate evidence)
GATA3
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Immune dysregulation
  • Hypoparathyroidism, sensorineural deafness, and renal dysplasia MIM#146255
Tags
Amber Amber List (moderate evidence)
HCK
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Autoinflammation with pulmonary and cutaneous vasculitis, MIM#620296
Tags
Amber Amber List (moderate evidence)
HSPA1L
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • inflammatory bowel disease, MONDO:0005265, HSPA1L-related
Tags
Amber Amber List (moderate evidence)
ICOSLG
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Combined immunodeficiency
  • recurrent bacterial and viral infections
  • neutropaenia
Tags
Amber Amber List (moderate evidence)
ICOSLG
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Immunodeficiency 119, MIM# 620825
  • Combined immunodeficiency
  • recurrent bacterial and viral infections
  • neutropaenia
Tags
Amber Amber List (moderate evidence)
IL21
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert Review
Phenotypes
  • Immunodeficiency, common variable, 11, MIM# 615767
Tags
Amber Amber List (moderate evidence)
IL27RA
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Epstein-Barr virus infection MONDO:0005111 , IL27RA-related
Tags
Amber Amber List (moderate evidence)
IL6R
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Recurrent pyogenic infections, cold abscesses
  • High circulating IL-6 levels
  • High IgE
  • IgE recurrent infection syndrome, MIM#618944
Tags
Amber Amber List (moderate evidence)
INO80
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Primary immunodeficiency, MONDO:0003778
Tags
Amber Amber List (moderate evidence)
IRF3
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • {Encephalopathy, acute, infection-induced (herpes-specific), susceptibility to, 7}, MIM# 616532
Tags
Amber Amber List (moderate evidence)
IRF9
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Immunodeficiency 65, susceptibility to viral infections 618648
Tags
Amber Amber List (moderate evidence)
JAK1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Susceptibility to mycobacteria and viruses
  • Viral infections
  • Autoinflammation, immunde dysregulation, and eosinophilia, MIM# 618999
Tags
Amber Amber List (moderate evidence)
KMT2A
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Wiedemann-Steiner syndrome MIM#605130
Tags
Amber Amber List (moderate evidence)
KNG1
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Hereditary angioedema-6 (HAE6), MIM#619363
Tags
Amber Amber List (moderate evidence)
LAMTOR2
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency due to defect in MAPBP-interacting protein, MIM# 610798
Tags
Amber Amber List (moderate evidence)
LCP1
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Bone marrow failure syndrome, MONDO:0000159, LCP1-related
Tags
Amber Amber List (moderate evidence)
LCP2
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Immunodeficiency 81, MIM# 619374
  • Severe combined immunodeficiency
Tags
Amber Amber List (moderate evidence)
MADD
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • HLH, enteropathy
Tags
Amber Amber List (moderate evidence)
MAPK8
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Chronic mucocutaneous candidiasis
  • Connective tissue disorders
Tags
Amber Amber List (moderate evidence)
MCM10
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Immunodeficiency-80 with or without congenital cardiomyopathy (IMD80), MIM#619313
  • Susceptibility to CMV
Tags
Amber Amber List (moderate evidence)
MCM4
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 54 MIM# 609981
  • Decreased NK cell number and function
  • Viral infections (EBV, HSV, VZV)
  • Short stature
  • B cell lymphoma
  • Adrenal failure
  • Failure to thrive
  • Microcephaly
  • Increased chromosomal breakage
  • Hyperpigmentation
  • Lymphadenopathy
Tags
  • founder
Amber Amber List (moderate evidence)
MKL1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Neutropaenia with combined immune deficiency
Tags
Amber Amber List (moderate evidence)
MS4A1
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 5, MIM# 613495
Tags
Amber Amber List (moderate evidence)
NFAT5
2 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immune deficiency disease, MONDO:0003778, NFAT5-related
  • Recurrent infections
  • Autoimmune enterocolopathy
  • EBV susceptibility
  • HLH
Tags
Amber Amber List (moderate evidence)
NFATC1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Inborn error of immunity, MONDO:0003778, NFATC1-related
  • Combined Immune deficiency
Tags
Amber Amber List (moderate evidence)
NLRC4
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Autoinflammation with infantile enterocolitis, MIM# 616050
Tags
Amber Amber List (moderate evidence)
NOX1
2 reviews
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Inflammatory bowel disease, MONDO:0005265, NOX1-related
Tags
Amber Amber List (moderate evidence)
NSMCE3
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Lung disease, immunodeficiency, and chromosome breakage syndrome, MIM#617241
Tags
Amber Amber List (moderate evidence)
PAX5
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Neurodevelopmental disorder MONDO:0700092, PAX5-related
  • Hypogammaglobulinaemia
Tags
Amber Amber List (moderate evidence)
PI4KA
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Gastrointestinal defects and immunodeficiency syndrome 2, MIM# 619708
Tags
Amber Amber List (moderate evidence)
PIK3CG
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Immunodeficiency 97 with autoinflammation, MIM# 619802
  • Humoral deficiency
  • Immune dysregulation
  • HLH
Tags
Amber Amber List (moderate evidence)
PLCG1
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Immune dysregulation, autoimmunity, and autoinflammation, MIM# 620514
Tags
Amber Amber List (moderate evidence)
PMS2
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Mismatch repair cancer syndrome, MIM# 276300
Tags
Amber Amber List (moderate evidence)
PMVK
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Autoinflammatory syndrome, MONDO:0019751, PMVK-related
Tags
Amber Amber List (moderate evidence)
POLD2
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Non-severe combined immunodeficiency due to polymerase delta deficiency MONDO:0800145
  • Low CD4 T cells
  • Low B cells, normal maturation
  • recurrent respiratory tract infections, skin infections, warts and molluscum
  • short stature
  • intellectual disability
Tags
Amber Amber List (moderate evidence)
POLR3A
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Severe VZV infection
Tags
Amber Amber List (moderate evidence)
POLR3C
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Severe VZV infection
Tags
Amber Amber List (moderate evidence)
PSMA3
1 review
Other
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Proteasome-associated autoinflammatory syndrome 1 and digenic forms, MIM#256040
Tags
Amber Amber List (moderate evidence)
PSMB4
1 review
Other
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Proteasome-associated autoinflammatory syndrome 3 and digenic forms, MIM# 617591
Tags
Amber Amber List (moderate evidence)
PTPN2
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Lupus
  • arthritis
  • common variable immunodeficiency
Tags
Amber Amber List (moderate evidence)
RAC2
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Common variable immunodeficiency
Tags
Amber Amber List (moderate evidence)
RC3H1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Relapsing HLH
  • Hemophagocytic lymphohistiocytosis, familial, 6, MIM# 618998
Tags
Amber Amber List (moderate evidence)
REL
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Immunodeficiency 92, MIM# 619652
  • Combined immunodeficiency
  • T cells: normal, decreased memory CD4, poor proliferation
  • B cells: low, mostly naive, few switched memory B cells, impaired proliferation
  • Recurrent infections with bacteria, mycobacteria, salmonella and opportunistic organisms
  • Defective innate immunity
Tags
Amber Amber List (moderate evidence)
RELB
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Immunodeficiency 53, MIM# 617585
  • T cells: normal number, poor diversity, poor function
  • recurrent infections
Tags
Amber Amber List (moderate evidence)
RHOG
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Genetic HLH, MONDO:0015541, RHOG-related
Tags
Amber Amber List (moderate evidence)
RIPK3
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Hereditary susceptibility to infections, MONDO:0015979, RIPK3-related
  • Recurrent HSV encephalitis
Tags
Amber Amber List (moderate evidence)
RNF31
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 115 with autoinflammation, MIM# 620632
Tags
Amber Amber List (moderate evidence)
RNF31
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert Review
Phenotypes
  • Immunodeficiency 115 with autoinflammation, MIM# 620632
Tags
Amber Amber List (moderate evidence)
SCGN
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • ulcerative colitis, MONDO:0005101
Tags
Amber Amber List (moderate evidence)
SLC19A1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Combined immunodeficiency, SLC19A1-related MONDO:0015131
Tags
Amber Amber List (moderate evidence)
SLC9A3
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert Review
Phenotypes
  • Diarrhoea 8, secretory sodium, congenital 616868
  • Very Early Onset Inflammatory Bowel Disease
Tags
Amber Amber List (moderate evidence)
SPPL2A
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Immunodeficiency 86, MIM#619549
  • Susceptibility to mycobacteria and Salmonella
Tags
Amber Amber List (moderate evidence)
SPPL2A
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Immunodeficiency 86, MIM#619549
Tags
Amber Amber List (moderate evidence)
SRP19
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Neutropenia, MONDO:0001475, SRP19-related
Tags
Amber Amber List (moderate evidence)
SRP68
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Neutropenia, severe congenital, 10, autosomal recessive, MIM# 620534
Tags
Amber Amber List (moderate evidence)
SRPRA
2 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Schwachman-Diamond syndrome MONDO:0009833, SRPA-related
Tags
Amber Amber List (moderate evidence)
TBX21
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Immunodeficiency 88, MIM# 619630
  • Susceptibility to mycobacterial disease
Tags
Amber Amber List (moderate evidence)
TBX21
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Immunodeficiency 88, MIM# 619630
Tags
Amber Amber List (moderate evidence)
TCIRG1
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Expert Review
Phenotypes
  • severe congenital neutropenia, MONDO:0018542
Tags
Amber Amber List (moderate evidence)
TERC
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyskeratosis congenita, autosomal dominant 1, MIM# 127550
Tags
Amber Amber List (moderate evidence)
TERT
2 reviews
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • {Dyskeratosis congenita, autosomal dominant 2}, MIM# 613989
  • {Dyskeratosis congenita, autosomal recessive 4}, MIM# 613989
Tags
Amber Amber List (moderate evidence)
TFRC
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Immunodeficiency 46, MIM# 616740
  • T cells: normal number, poor proliferation
  • B cells: normal number, low memory B cells
  • recurrent infections, neutorpaenia
  • thrombocytopaenia
Tags
Amber Amber List (moderate evidence)
TGFB1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Inflammatory bowel disease, immunodeficiency, and encephalopathy, MIM# 618213
Tags
Amber Amber List (moderate evidence)
TGFB1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Inflammatory bowel disease, immunodeficiency, and encephalopathy MIM# 618213
Tags
Amber Amber List (moderate evidence)
TINF2
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyskeratosis congenita, autosomal dominant 3, MIM# 613990
  • Revesz syndrome, MIM# 268130
Tags
Amber Amber List (moderate evidence)
TNFRSF13C
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 4, MIM# 613494
Tags
Amber Amber List (moderate evidence)
TNFRSF13C
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 4, MIM# 613494
Tags
Amber Amber List (moderate evidence)
TRAC
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Expert list
Phenotypes
  • Immunodeficiency 7, TCR-alpha/beta deficient, MIM#615387
Tags
  • founder
Amber Amber List (moderate evidence)
TRAF3IP2
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Candidiasis, familial, 8, MIM# 615527
Tags
Amber Amber List (moderate evidence)
TRAF3IP2
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Candidiasis, familial, 8, MIM# 615527
Tags
Amber Amber List (moderate evidence)
UNC93B1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Encephalopathy, acute, infection-induced (herpes-specific), susceptibility to, 1
Tags
Amber Amber List (moderate evidence)
UNC93B1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Encephalopathy, acute, infection-induced (herpes-specific), susceptibility to, 1
Tags
Amber Amber List (moderate evidence)
WIPF1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Wiskott-Aldrich syndrome 2, MIM# 614493
Tags
Amber Amber List (moderate evidence)
ZAP70
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Other
Phenotypes
  • Autoimmune disease, multisystem, infantile-onset, 2
  • inflammatory colitis
Tags
Red Red List (low evidence)
APOL1
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • {Glomerulosclerosis, focal segmental, 4, susceptibility to} 612551
Tags
Red Red List (low evidence)
ARHGEF1
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Immunodeficiency 62, MIM#618459
Tags
Red Red List (low evidence)
C8G
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
CARD10
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Immunodeficiency 89 and autoimmunity, MIM# 619632
Tags
Red Red List (low evidence)
CASP4
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Hereditary susceptibility to infection, MONDO:0015979, CASP4-related
  • Susceptibility to meliodiosis
Tags
Red Red List (low evidence)
CFHR1
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
CFHR2
1 review
1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • C3 glomerulopathy
  • C3G
  • Immune complex MPGN
  • IC-MPGN
Tags
  • SV/CNV
Red Red List (low evidence)
CFHR3
1 review
1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • {Hemolytic uremic syndrome, atypical, susceptibility to}, MIM# 235400
Tags
Red Red List (low evidence)
CFHR4
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
CFHR5
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Nephropathy due to CFHR5 deficiency, MIM# 614809
Tags
Red Red List (low evidence)
CLEC7A
2 reviews
2 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Candidiasis, familial, 4, autosomal recessive MIM#613108
  • {Aspergillosis, susceptibility to} , MIM#614079
  • Mucocutaneous candidiasis
Tags
Red Red List (low evidence)
COL7A1
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Epidermolysis bullosa dystrophica, AR, MIM# 226600
Tags
Red Red List (low evidence)
CRACR2A
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • primary immunodeficiency disease, MONDO:0003778, CRACR2A-associated
  • late onset combined immunodeficiency
Tags
Red Red List (low evidence)
DCLRE1B
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyskeratosis congenita and Hoyeraal-Hreidarsson (HH) syndrome
Tags
Red Red List (low evidence)
ERCC2
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Australian Genomics Health Alliance Immunology Flagship
Phenotypes
  • Trichothiodystrophy 1, photosensitive, MIM# 601675
  • Xeroderma pigmentosum, group D 27, MIM#8730
Tags
Red Red List (low evidence)
ERCC3
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Australian Genomics Health Alliance Immunology Flagship
Phenotypes
  • Trichothiodystrophy 2, photosensitive, MIM# 616390
  • Xeroderma pigmentosum, group B 61, MIM#0651
Tags
Red Red List (low evidence)
FAAP24
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Immunodeficiency-associated lymphoproliferative disease, MONDO:0020083, FAAP24-related
Tags
Red Red List (low evidence)
FBXW11
2 reviews
2 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Autoinflammatory disorder MONDO:0019751, FBXW11-related
Tags
Red Red List (low evidence)
FERMT1
1 review
1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Kindler syndrome, MIM# 173650
Tags
Red Red List (low evidence)
FMNL2
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • inflammatory bowel disease, MONDO:0005265, FMNL2-related
Tags
Red Red List (low evidence)
FPR1
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Periodontitis
Tags
Red Red List (low evidence)
FUT2
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Norwalk virus infection, resistance to
Tags
Red Red List (low evidence)
GTF2H5
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Australian Genomics Health Alliance Immunology Flagship
Phenotypes
  • Trichothiodystrophy 3, photosensitive, MIM# 616395
Tags
Red Red List (low evidence)
HS3ST6
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Hereditary angioedema-8 (HAE8), MIM#619367
Tags
Red Red List (low evidence)
IFNG
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Mendelian susceptibility to mycobacterial disease
  • Immunodeficiency 69, MIM#618963
Tags
Red Red List (low evidence)
IL12RB2
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Susceptibility to mycobacteria and Salmonella
Tags
Red Red List (low evidence)
IL17F
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Candidiasis, familial, 6, autosomal dominant, MIM# 613956
Tags
Red Red List (low evidence)
IL17F
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Candidiasis, familial, 6, autosomal dominant, MIM# 613956
Tags
Red Red List (low evidence)
IL18BP
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • {?Hepatitis, fulminant viral, susceptibility to} 618549
Tags
Red Red List (low evidence)
IL1R1
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Chronic recurrent multifocal osteomyelitis 3, MIM# 259680
Tags
Red Red List (low evidence)
IL21
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 11, MIM# 615767
Tags
Red Red List (low evidence)
IL21
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Immunodeficiency, common variable, 11 MIM#615767
Tags
Red Red List (low evidence)
IL37
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Inflammatory bowel disease (infantile ulcerative colitis) 31, MIM# 619398
Tags
Red Red List (low evidence)
IL6ST
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Immunodeficiency 94 with autoinflammation and dysmorphic facies 619750
Tags
Red Red List (low evidence)
IRAK1
1 review
1 red
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Susceptibility to bacterial infections
Tags
  • SV/CNV
Red Red List (low evidence)
ITGAM
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
ITPKB
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Severe combined immunodeficiency, absent T cells, present B cells and NK cells
Tags
Red Red List (low evidence)
LY96
2 reviews
2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Inborn error of immunity, MONDO:0003778, LY96-related
  • Colitis
Tags
Red Red List (low evidence)
MAN2B2
2 reviews
2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Congenital disorder of glycosylation, MONDO:0015286, MAN2B2-related
  • Combined Immune deficiency
Tags
Red Red List (low evidence)
MAP1LC3B2
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Other
Phenotypes
  • Hereditary susceptibility to infection, MONDO:0015979, MAP1LC3B2 -related
  • Mollaret’s meningitis (recurrent lymphocytic meningitis) due to HSV2
Tags
Red Red List (low evidence)
MASP2
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • MASP2 deficiency, MIM# 613791
Tags
Red Red List (low evidence)
MS4A1
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency, common variable, 5, MIM# 613495
Tags
Red Red List (low evidence)
MSH6
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Mismatch repair cancer syndrome 3 MIM#619097
  • constitutional mismatch repair deficiency
  • immunodeficiency
Tags
Red Red List (low evidence)
MYOF
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Hereditary angioedema-7 (HAE7), MIM#619366
Tags
Red Red List (low evidence)
NFKBID
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Australian Genomics Health Alliance Immunology Flagship
Tags
Red Red List (low evidence)
NFKBID
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
NFKBID
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
NFKBID
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
NLRP1
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Recurrent respiratory papillomatosis
Tags
Red Red List (low evidence)
NOP10
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
  • Victorian Clinical Genetics Services
Phenotypes
  • Dyskeratosis congenita, autosomal recessive 1, MIM#224230
Tags
Red Red List (low evidence)
NOS2
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Disseminated CMV disease
Tags
Red Red List (low evidence)
PDCD1
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Complex Autoimmunity
  • Inborn errors of immunity, MONDO:0003778
Tags
Red Red List (low evidence)
PMM2
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Congenital disorder of glycosylation, type Ia, MIM# 212065
  • Inflammatory bowel disease, hyperinsulinism, polycystic kidney disease
Tags
Red Red List (low evidence)
POLE2
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Combined immunodeficiency
  • Lymphopaenia
  • Lack of TRECS, absent proliferation in response to antigens
  • Hypoglobulinaemia
  • Recurrent infections, disseminated BCG infections
  • Autoimmunity
  • Facial dysmorphism
Tags
Red Red List (low evidence)
POLR3F
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Immunodeficiency 101 (varicella zoster virus-specific), MIM# 619872
Tags
Red Red List (low evidence)
POU2AF1
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Agammaglobulinaemia, MONDO:0015977, POU2AF1-related
Tags
Red Red List (low evidence)
PSMA5
1 review
1 red
Other
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Inborn error of immunity, MONDO:0003778, PSMA5-related
  • PRAAS/CANDLE
Tags
Red Red List (low evidence)
PSMG2
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Proteasome-associated autoinflammatory syndrome 4, MIM# 619183
  • CANDLE syndrome
  • Chronic atypical neutrophilic dermatitis with lipodystrophy
Tags
Red Red List (low evidence)
PTEN
2 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Victorian Clinical Genetics Services
Phenotypes
  • Colitis
Tags
Red Red List (low evidence)
RGS10
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Immunodeficiency
  • short stature
Tags
Red Red List (low evidence)
RHOH
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • {?Epidermodysplasia verruciformis, susceptibility to, 4}, MIM# 618307
Tags
Red Red List (low evidence)
SEMA3E
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • CHARGE syndrome, MIM# 214800
Tags
Red Red List (low evidence)
SH3BP2
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Cherubism, MIM# 118400
Tags
Red Red List (low evidence)
SH3KBP1
1 review
1 red
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Immunodeficiency 61, MIM# 300310
Tags
  • SV/CNV
Red Red List (low evidence)
SIRT1
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • autoimmune disease, MONDO:0007179, SIRT1-related
Tags
Red Red List (low evidence)
TAOK2
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Other
Phenotypes
  • Generalized verrucosis
  • abnormal T cell activation
Tags
Red Red List (low evidence)
TAPBP
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Bare lymphocyte syndrome, type I, MIM# 604571
  • MHC class I deficiency 3, MIM# 620814
Tags
  • SV/CNV
Red Red List (low evidence)
THBD
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • {Hemolytic uremic syndrome, atypical, susceptibility to, 6}, MIM# 612926
Tags
Red Red List (low evidence)
TIRAP
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Staphylococcal disease during childhood
Tags
Red Red List (low evidence)
TKFC
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Inborn error of immunity, MONDO:0003778, TKFC-related
Tags
Red Red List (low evidence)
TNFRSF4
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Immunodeficiency 16, MIM# 615593
Tags
Red Red List (low evidence)
TNFRSF4
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Immunodeficiency 16, MIM# 615593
Tags
Red Red List (low evidence)
TNFSF12
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Recurrent infections, poor antibody responses, decreased immunoglobulins
Tags
Red Red List (low evidence)
TNFSF12
2 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Recurrent infections, poor antibody responses, decreased immunoglobulins
Tags
Red Red List (low evidence)
TNFSF13
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Hypogammaglobulinaemia, MONDO:0015977, TNSF13-related
Tags
Red Red List (low evidence)
TOM1
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Immunodeficiency 85 and autoimmunity, MIM# 619510
Tags
Red Red List (low evidence)
TPP1
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Hoyeraal-Hreidarsson syndrome
Tags
Red Red List (low evidence)
TRAF3
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • {?Encephalopathy, acute, infection-induced (herpes-specific), susceptibility to, 5}, MIM# 614849
Tags
Red Red List (low evidence)
TRAF3
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Immunology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • {?Encephalopathy, acute, infection-induced (herpes-specific), susceptibility to, 5}, MIM# 614849
Tags
Red Red List (low evidence)
TRIM69
1 review
1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • Susceptibility to herpes simplex encephalitis
Tags
Red Red List (low evidence)
UNC119
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Expert list
Phenotypes
  • ?Immunodeficiency 13 MIM#615518
Tags
Red Red List (low evidence)
VAV1
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Common variable immnodeficiency
Tags
No list No list
ELF4
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Literature
Phenotypes
  • Inflammatory bowel disease
Tags
No list No list
NUDCD3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Literature
Phenotypes
  • Severe combined immunodeficiency
  • omenn syndrome
Tags
No list No list
USP18
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Literature
Phenotypes
  • Susceptibility to mycobacterial disease
Tags

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