Description
This panel contains genes that cause early-onset Parkinson disease and conditions where parkinsonism is a prominent feature. It is maintained by VCGS and RMH.
The original panel as of 17/11/2019 was developed and used by the Melbourne Genomics Complex Neurology Flagship.

14 reviewers

  • Sebastian Lunke (Victorian Clinical Genetics Services)

  • Kaitlyn Dianna Weldon (University of Melbourne)

  • SHEKEEB MOHAMMAD (Children's Hospital at Westmead)

  • Chirag Patel (Genetic Health Queensland)

  • Ain Roesley (Victorian Clinical Genetics Services)

  • Elena Savva (Victorian Clinical Genetics Services)

  • Bryony Thompson (Royal Melbourne Hospital)

  • Seb Lunke (Victorian Clinical Genetics Services)

  • Shekeeb Mohammad (Children's Hospital at Westmead)

  • Claire Fryer-Smith (University of Melbourne)

  • Sangavi Sivagnanasundram (Melbourne Health)

  • Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)

  • Ee Ming Wong (Victorian Clinical Genetics Services)

  • Michelle Torres (Victorian Clinical Genetics Services)

130 Entities

130 reviewed, 93 green

List Entity Reviews Mode of inheritance Details
130 Entitiess
Green Green List (high evidence)
ADAR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Aicardi-Goutieres syndrome 6
  • neuroinflammatory disorder with cerebral calcification
  • progressive loss of cognition
  • spasticity
  • dystonia
  • parkinsonism
  • OMIM 615010
Tags
Green Green List (high evidence)
ATP13A2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • parkinsonism due to ATP13A2 deficiency MONDO:0017809
Tags
Green Green List (high evidence)
ATP1A3
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • ATP1A3-associated neurological disorder MONDO:0700002
Tags
Green Green List (high evidence)
ATP6AP2
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Parkinsonism with spasticity, X-linked, MIM# 300911
Tags
Green Green List (high evidence)
ATP7B
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Wilson disease MIM#277900
Tags
Green Green List (high evidence)
ATXN1_CAG
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Spinocerebellar Ataxia type 1
  • Parkinsonism
  • OMIM 164400
Tags
Green Green List (high evidence)
C19orf12
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • neurodegeneration with brain iron accumulation 4 MONDO:0013674
Tags
Green Green List (high evidence)
C9orf3
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Dystonia 31, MIM# 619565
  • Childhood/Adolescence onset generalised dystonia
  • Dystonia parkinsonism
  • Zech-Boesch Syndrome
Tags
  • new gene name
Green Green List (high evidence)
CHCHD2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Parkinson disease 22, autosomal dominant MIM#616710
Tags
Green Green List (high evidence)
CLN3
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Ceroid lipofuscinosis, neuronal, 3 MIM#204200
Tags
Green Green List (high evidence)
CP
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Aceruloplasminaemia, MIM#604290
Tags
Green Green List (high evidence)
CSF1R
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • leukoencephalopathy, diffuse hereditary, with spheroids 1 MONDO:0800027
Tags
Green Green List (high evidence)
CYP27A1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Cerebrotendinous xanthomatosis, MIM# 213700
  • Cerebrotendinous xanthomatosis, infantile-onset diarrhoea, juvenile-onset cataract, young adult-onset tendon xanthomas
  • Epilepsy
  • Parkinsonism
  • Ataxia
  • Peripheral neuropathy
Tags
Green Green List (high evidence)
DCTN1
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Perry syndrome MONDO:0008201
Tags
Green Green List (high evidence)
DNAJC12
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Hyperphenylalaninemia, mild, non-BH4-deficient, MIM#617384
Tags
Green Green List (high evidence)
DNAJC5
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Ceroid lipofuscinosis, neuronal, 4, Parry type, MIM# 162350
Tags
Green Green List (high evidence)
DNAJC6
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • juvenile onset Parkinson disease 19A MONDO:0014231
Tags
Green Green List (high evidence)
EIF2AK2
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Leukoencephalopathy, developmental delay, and episodic neurologic regression syndrome, MIM# 618877
  • Neurodevelopmental Syndrome
  • Developmental delays
  • Ataxia
  • Parkinsonism
  • White matter alterations
Tags
Green Green List (high evidence)
FBXO7
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • parkinsonian-pyramidal syndrome MONDO:0009830
Tags
Green Green List (high evidence)
FOXG1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Rett syndrome, congenital variant, MIM# 613454
  • Developmental and Epileptic Encephalopathy
  • Dystonia,
  • Athetosis
  • Parkinsonism
  • Stereotypies
Tags
Green Green List (high evidence)
FRRS1L
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Developmental and epileptic encephalopathy 37, MIM# 616981
  • Seizures
  • Chorea
  • Parkinsonism
  • Developmental delay
Tags
Green Green List (high evidence)
FTDALS
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Frontotemporal dementia and/or amyotrophic lateral sclerosis 1 MIM#105550
Tags
Green Green List (high evidence)
FTL
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Tags
Green Green List (high evidence)
FXTAS
STR
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Fragile X tremor/ataxia syndrome MIM#300623
Tags
Green Green List (high evidence)
GBA
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Parkinson's disease, MONDO:0005180, GBA-related
Tags
Green Green List (high evidence)
GCH1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Dystonia, DOPA-responsive, with or without hyperphenylalaninemia, MIM# 128230
Tags
Green Green List (high evidence)
GLB1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • GM1-gangliosidosis, type III , MIM#230650
  • Parkinsonism
Tags
Green Green List (high evidence)
GRN
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Frontotemporal lobar degeneration with ubiquitin-positive inclusions, MIM# 607485
Tags
Green Green List (high evidence)
HD
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Huntington disease MIM#143100
Tags
  • STR
Green Green List (high evidence)
KIAA1161
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Basal ganglia calcification, idiopathic, 7, autosomal recessive, OMIM #618317
  • Primary familial brain calcification
  • Atypical parkinsonism
  • Supranuclear gaze palsy
Tags
  • new gene name
Green Green List (high evidence)
KMT2B
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Dystonia 28, childhood-onset , MIM#617284
Tags
Green Green List (high evidence)
LRRK2
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Tags
Green Green List (high evidence)
LYST
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Chediak-Higashi syndrome MONDO:0008963
Tags
Green Green List (high evidence)
MAPT
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • late-onset Parkinson disease MONDO:0008199
Tags
Green Green List (high evidence)
MECP2
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • MECP2-related disorders
  • Rett syndrome, MIM# 312750
  • Mental retardation, X-linked, syndromic 13, MIM# 300055
Tags
Green Green List (high evidence)
NIID
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Neuronal intranuclear inclusion disease MIM#603472
  • Oculopharyngodistal myopathy 3 MIM#619473
  • Tremor, hereditary essential, 6 MIM#618866
Tags
Green Green List (high evidence)
NPC1
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Niemann-Pick disease, MIM# 257220
  • Parkinsonism
Tags
Green Green List (high evidence)
NPC2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Niemann Pick C2, OMIM 607625
  • Parkinsonism
Tags
Green Green List (high evidence)
NR4A2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Intellectual developmental disorder with language impairment and early-onset DOPA-responsive dystonia-parkinsonism, MIM# 619911
Tags
Green Green List (high evidence)
NUS1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Intellectual developmental disorder, autosomal dominant 55, with seizures, MIM# 617831
  • Parkinsonism
  • Developmental delay
  • Intellectual disability
  • Ataxia
  • Myoclonus
Tags
Green Green List (high evidence)
PANK2
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • pantothenate kinase-associated neurodegeneration MONDO:0009319
Tags
Green Green List (high evidence)
PARK7
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • autosomal recessive early-onset Parkinson disease 7 MONDO:0011658
Tags
Green Green List (high evidence)
PDE8B
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Striatal degeneration, autosomal dominant, MIM#609161
Tags
Green Green List (high evidence)
PDGFB
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Basal ganglia calcification, idiopathic, 5, MIM# 615483
Tags
Green Green List (high evidence)
PDGFRB
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Basal ganglia calcification, idiopathic, 4, MIM# 615007
Tags
Green Green List (high evidence)
PGK1
2 reviews
2 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Phosphoglycerate kinase 1 deficiency, MIM# 300653
  • Haemolytic anaemia
  • Rhabdomyolysis
  • Myopathy
  • Juvenile Parkinsonism
  • OMIM 300653
Tags
Green Green List (high evidence)
PINK1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Parkinson disease 6, early onset MIM#605909
Tags
Green Green List (high evidence)
PLA2G6
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • autosomal recessive Parkinson disease 14 MONDO:0013060
Tags
Green Green List (high evidence)
POLG
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • autosomal dominant progressive external ophthalmoplegia MONDO:0008003
Tags
Green Green List (high evidence)
POLR3A
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Leukodystrophy, hypomyelinating, 7, with or without oligodontia and/or hypogonadotropic hypogonadism, MIM# 607694
  • POLR3A Leukoencephalopathy
  • Parkinsonism
  • Ocular and dental abnormality
  • Hypogonadism
Tags
Green Green List (high evidence)
PPP2R5D
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Early onset Parkinsonism
  • Mental retardation, autosomal dominant 35, MIM# 616355
Tags
Green Green List (high evidence)
PRKCG
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Spinocerebellar ataxia 14, MIM# 605361
  • Myoclonus
  • Parkinsonism
Tags
Green Green List (high evidence)
PRKN
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • autosomal recessive juvenile Parkinson disease 2 MONDO:0010820
Tags
Green Green List (high evidence)
PRKRA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • dystonia 16 MONDO:0012789
Tags
Green Green List (high evidence)
PRNP
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • inherited Creutzfeldt-Jakob disease MONDO:0007403
  • Gerstmann-Straussler-Scheinker syndrome MONDO:0007656
Tags
Green Green List (high evidence)
PSAP
3 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Parkinson disease 24, autosomal dominant, susceptibility to, MIM# 619491
Tags
Green Green List (high evidence)
PSEN1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Alzheimer disease 3 MONDO:0011913
Tags
Green Green List (high evidence)
PSMF1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Complex neurodevelopmental disorder with motor features, MONDO:0100516, PSMF1-related
Tags
Green Green List (high evidence)
PTRHD1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Neurodevelopmental disorder with early-onset parkinsonism and behavioral abnormalities, MIM# 620747
Tags
Green Green List (high evidence)
PTS
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Tags
Green Green List (high evidence)
QDPR
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Hyperphenylalaninemia, BH4-deficient, C, MIM#261630
  • Dehydropteridin reductase deficiency, Infantile-onset dystonia
  • Parkinsonism
  • Epilepsy
  • Autonomic dysfunction
  • Hyperphenylalaninemia
Tags
Green Green List (high evidence)
RAB39B
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Early-onset parkinsonism-intellectual disability syndrome MONDO:0010709
Tags
Green Green List (high evidence)
SCN1A
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Dravet syndrome, MIM# 607208
  • Epilepsy, Paekinsonism
Tags
Green Green List (high evidence)
SERAC1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • 3-methylglutaconic aciduria with deafness, encephalopathy, and Leigh-like syndrome, MIM# 614739
  • Parkinsonism
Tags
Green Green List (high evidence)
SLC18A2
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Parkinsonism-dystonia, infantile, 2 , MIM# 618049
  • Brain dopamine-serotonin transport disease, Childhood-onset parkinsonism
Tags
Green Green List (high evidence)
SLC19A3
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Thiamine metabolism dysfunction syndrome 2 (biotin- or thiamine-responsive encephalopathy type 2), MIM# 607483
  • Childhood onset Dystonia and Parkinsonism
Tags
Green Green List (high evidence)
SLC20A2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Basal ganglia calcification, idiopathic, 1, MIM# 213600
Tags
Green Green List (high evidence)
SLC30A10
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • cirrhosis - dystonia - polycythemia - hypermanganesemia syndrome MONDO:0013208
Tags
Green Green List (high evidence)
SLC39A14
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Hypermanganesemia with dystonia 2 (MIM# 617013)
Tags
Green Green List (high evidence)
SLC6A3
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Parkinsonism-dystonia, infantile, 1, MIM# 613135
Tags
Green Green List (high evidence)
SNCA
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Dementia, Lewy body (MIM#127750)
  • Parkinson disease 1 (MIM#168601)
  • Parkinson disease 4 (MIM#605543)
Tags
  • SV/CNV
Green Green List (high evidence)
SOX6
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Tolchin-Le Caignec syndrome, MIM# 618971
  • Developmental delay
  • ID
  • ASD
  • ADHD
  • Parkinsonism
  • Syringomyelia
Tags
Green Green List (high evidence)
SPG11
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • hereditary spastic paraplegia 11 MONDO:0011445
Tags
Green Green List (high evidence)
SPG7
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Spastic paraplegia 7, autosomal recessive, MIM# 607259
  • Ataxia
  • Progressive external opthalmoplegia
  • Parkinsonism
Tags
Green Green List (high evidence)
SPR
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Dopa-responsive dystonia due to sepiapterin reductase deficiency MONDO:0012994
Tags
Green Green List (high evidence)
STUB1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Spinocerebellar Ataxia 48, OMIM 618093
  • Parkinsonism
Tags
Green Green List (high evidence)
STXBP1
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Developmental and epileptic encephalopathy 4, MIM# 612164
  • Juvenile onset Parkinsonism
Tags
Green Green List (high evidence)
SYNJ1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Parkinson disease 20, early-onset, MIM# 615530
Tags
Green Green List (high evidence)
TBC1D24
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Developmental and epileptic encephalopathy 16, MIM# 615338
  • Intellectual disability
  • Parkinsonism
  • Seizures
  • Psychosis
Tags
Green Green List (high evidence)
TH
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Tyrosine hydroxylase deficiency MONDO:0100064
Tags
Green Green List (high evidence)
TPP1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Ceroid lipofuscinosis, neuronal, 2, MIM# 204500
  • Parkinsonism
Tags
Green Green List (high evidence)
TWNK
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal dominant 3 MIM#609286
Tags
Green Green List (high evidence)
UBTF
2 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Neurodegeneration, childhood-onset, with brain atrophy, MIM# 617672
  • Parkinsonism
  • Dystonia
  • Chorea
  • Brain atrophy
Tags
Green Green List (high evidence)
VAC14
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Striatonigral degeneration, childhood-onset, MIM# 617054
  • Dystonia
  • Parkinsonism
Tags
Green Green List (high evidence)
VCP
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Inclusion body myopathy with Paget disease of bone and frontotemporal dementia MONDO:0000507
Tags
Green Green List (high evidence)
VPS13A
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • chorea-acanthocytosis MONDO:0008695
Tags
Green Green List (high evidence)
VPS13C
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Parkinson disease 23, autosomal recessive, early onset MIM#616840
Tags
Green Green List (high evidence)
VPS35
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Parkinson disease 17, MIM# 614203
Tags
Green Green List (high evidence)
WARS2
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Parkinsonism-dystonia 3, childhood-onset, MIM# 619738
Tags
Green Green List (high evidence)
WDR45
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • X-linked complex neurodevelopmental disorder MONDO:0100148
Tags
Green Green List (high evidence)
XDP
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Dystonia-Parkinsonism, X-linked MIM#314250
Tags
  • founder
Green Green List (high evidence)
XPR1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Basal ganglia calcification, idiopathic, 6, MIM# 616413
Tags
Green Green List (high evidence)
ZFYVE26
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Spastic paraplegia 15, autosomal recessive, MIM# 270700
  • Spastic paraplegia and retinal degeneration
  • Kjellin syndrome
  • Parkinsonism
Tags
Amber Amber List (moderate evidence)
AFG3L2
3 reviews
1 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Spinocerebellar ataxia 28, MIM# 610246
  • optic atrophy
  • spastic ataxia
  • L-dopa-responsive parkinsonism
Tags
Amber Amber List (moderate evidence)
APP
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Alzheimer disease 1, familial, MIM# 104300
Tags
Amber Amber List (moderate evidence)
COASY
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Neurodegeneration with brain iron accumulation 6, MIM# 615643
Tags
Amber Amber List (moderate evidence)
DDC
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Aromatic L-amino acid decarboxylase deficiency, MIM# 608643
  • Infantile-onset parkinsonism & dystonia
  • Bulbar dysfunction
  • Oculogyric crisis
  • Autonomic dysfunction
  • Intellectual disability
Tags
Amber Amber List (moderate evidence)
DHDDS
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Developmental delay and seizures with or without movement abnormalities, MIM# 617836
  • Myoclonic Epilepsy
  • Parkinsonism
  • Ataxia
  • Intellectual disability
Tags
Amber Amber List (moderate evidence)
EPM2A
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Epilepsy, progressive myoclonic 2A (Lafora), MIM# 254780
  • Progressive Myoclonic Epilepsy
  • Parkinsonism
Tags
Amber Amber List (moderate evidence)
KIF5A
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Spastic paraplegia 10, autosomal dominant MIM#604187
Tags
Amber Amber List (moderate evidence)
NHLRC1
2 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Epilepsy, progressive myoclonic 2B (Lafora), MIM# 254780
  • Lafora disease
  • Progressive Myoclonic Epilepsy
  • Parkinsonism
Tags
Amber Amber List (moderate evidence)
PTPA
2 reviews
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Intellectual disability, MONDO: 36073231, PTPA-related
  • Parkisonism
Tags
Amber Amber List (moderate evidence)
UQCRC1
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Parkinsonism with polyneuropathy, MIM# 619279
Tags
Red Red List (low evidence)
ALPL
2 reviews
1 green 1 red
BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Hypophosphatasia, adult, MIM# 146300
  • Osteomalacia
  • Parkinsonism
Tags
Red Red List (low evidence)
ANG
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Parkinson disease MONDO:0005180
Tags
Red Red List (low evidence)
DCAF17
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
DNAJC13
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Red
Tags
Red Red List (low evidence)
FUS
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • tremor, hereditary essential, 4 MONDO:0013888
Tags
Red Red List (low evidence)
GIGYF2
2 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • {Parkinson disease 11} , OMIM # 607688
Tags
Red Red List (low evidence)
HEXA
2 reviews
1 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • GM2 Gangliosidosis
  • Tay-Sachs disease
  • Parkinsonism
  • OMIM 272800
Tags
Red Red List (low evidence)
OPA3
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
PODXL
1 review
Unknown
Sources
  • Literature
Phenotypes
  • juvenile-onset Parkinson disease
Tags
Red Red List (low evidence)
PSEN2
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Other
Phenotypes
  • Parkinsonism
  • Alzheimer disease-4 MIM#606889
Tags
Red Red List (low evidence)
RAB32
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Parkinson disease MONDO:0005180
Tags
Red Red List (low evidence)
RIC3
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Other
Phenotypes
  • Parkinson disease
Tags
Red Red List (low evidence)
TMEM230
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
Phenotypes
  • Parkinson disease 21, MIM#616361
Tags
Red Red List (low evidence)
TUBB4A
2 reviews
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Tags
Red Red List (low evidence)
WASL
2 reviews
1 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Parkinson's disease, MONDO:0005180, WASL-related
Tags
No list No list
ATXN10
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Removed
  • Literature
Phenotypes
  • Spinocerebellar Ataxia 10
  • Parkinsonism
  • OMIM 603516
Tags
  • STR
No list No list
ATXN2
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Removed
  • Literature
Phenotypes
  • Spinocerebellar Ataxia 2
  • Parkinsonism
  • Myoclonus
  • OMIM 183090
Tags
  • STR
No list No list
ATXN3
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Removed
  • Literature
Phenotypes
  • Spinocerebellar 3
  • Machado Joseph disease
  • Ataxia
  • Parkinsonism
  • OMIM 109150
Tags
  • STR
No list No list
ATXN8
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Removed
  • Literature
Phenotypes
  • Spinocerebellar 8
  • Parkinsonism
  • OMIM 608768
Tags
  • STR
No list No list
C9orf72
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Removed
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Frontotemporal dementia and/or amyotrophic lateral sclerosis 1 MIM#105550
Tags
  • STR
No list No list
FMR1
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Removed
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Fragile X tremor/ataxia syndrome MIM#300623
Tags
  • STR
No list No list
HTT
1 review
1 green
Unknown
Sources
  • Expert Review Removed
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Tags
  • STR
No list No list
JPH3
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Removed
  • Literature
Phenotypes
  • Huntington Disease Like 2 (HDL2)
  • Parkinsonism
  • Severe Dementia
  • OMIM 606438
Tags
  • STR
No list No list
MT-ND6
1 review
1 green
MITOCHONDRIAL
Sources
  • Literature
Phenotypes
  • Leber Optic Atrophy
  • Parkinsonism
  • OMIM 516006
Tags
  • mtDNA
No list No list
PPP2R2B
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Removed
  • Literature
Phenotypes
  • Spinocerebellar ataxia 12
  • Parkinsonism
  • OMIM 604326
Tags
  • STR
No list No list
TAF1
2 reviews
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Removed
  • Melbourne Genomics Health Alliance Complex Neurology Flagship
  • Victorian Clinical Genetics Services
Phenotypes
  • Dystonia-Parkinsonism, X-linked, MIM# 314250
Tags
  • deep intronic
  • founder
  • STR
No list No list
TBP
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Removed
  • Literature
Phenotypes
  • Spinocerebellar Ataxia 17
  • Parkinsonism
  • Chorea
  • Seizures
  • Psychosis
  • Dementia
  • OMIM 607136
Tags
  • STR

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