Description
This panel contains genes that cause miscellaneous metabolic disorders, that are not present on any of the more specific metabolic disorders panels (see the Metabolic Disorders Superpanel for the full list of panels). It contains, but is not limited to, the following groups of conditions:
-Disorders of purine and pyrimidine metabolism
-Organic acidurias, and other disorders of amino acid and peptide metabolism
-Disorders of bile acid metabolism and transport, and other disorders of the metabolism of sterols
-Disorders of nucleotide metabolism
-Disorders of glucose transport, and other disorders of carbohydrate metabolism (excluding glycogen storage disorders)
-Disorders of zinc and manganese metabolism
-Disorders of vitamins and cofactors

This panel is a component of the Metabolic Disorders Superpanel.

12 reviewers

  • Kristin Rigbye (Victorian Clinical Genetics Services)

  • Alison Yeung (Victorian Clinical Genetics Services)

  • Eleanor Williams (Genomics England)

  • Ain Roesley (Victorian Clinical Genetics Services)

  • Krithika Murali (Victorian Clinical Genetics Services)

  • Elena Savva (Victorian Clinical Genetics Services)

  • Hazel Phillimore (Victorian Clinical Genetics Services)

  • Crystle Lee (Victorian Clinical Genetics Services)

  • Bryony Thompson (Royal Melbourne Hospital)

  • Melanie Marty (Victorian Clinical Genetics Services)

  • Zornitza Stark (Victorian Clinical Genetics Services; Australian Genomics)

  • Chern Lim (Victorian Clinical Genetics Services)

145 Entities

145 reviewed, 124 green

List Entity Reviews Mode of inheritance Details
145 Entitiess
Green Green List (high evidence)
ABCB11
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Phenotypes
  • Cholestasis, progressive familial intrahepatic 2 MIM#601847
  • disorder of bile acid metabolism
Tags
Green Green List (high evidence)
ABCB4
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Cholestasis, progressive familial intrahepatic 3 MIM#602347
  • disorder of bile acid metabolism
Tags
Green Green List (high evidence)
ABHD12
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Phenotypes
  • Polyneuropathy, hearing loss, ataxia, retinitis pigmentosa, and cataract MIM#612674
  • disorder of of endocannabinoid metabolism
Tags
Green Green List (high evidence)
ABHD5
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Phenotypes
  • Chanarin-Dorfman syndrome MIM#275630
  • neutral lipid storage disease with ichthyosis
  • lipid metabolism
Tags
Green Green List (high evidence)
ACY1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Aminoacylase 1 deficiency MIM#609924
  • disorder of amino acid metabolism
Tags
Green Green List (high evidence)
ADA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Adenosine deaminase deficiency, partial MIM#102700
  • Severe combined immunodeficiency due to ADA deficiency MIM#102700
  • disorder of purine metabolism
Tags
Green Green List (high evidence)
ADSL
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Adenylosuccinase deficiency MIM#103050
  • disorder of purine metabolism
Tags
Green Green List (high evidence)
AHCY
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Phenotypes
  • Hypermethioninemia with deficiency of S-adenosylhomocysteine hydrolase MIM#613752
  • disorder of methionine metabolism
Tags
  • treatable
Green Green List (high evidence)
AKR1D1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Phenotypes
  • Bile acid synthesis defect, congenital, 2 MIM#235555
  • disorder of bile acid metabolism
Tags
  • treatable
Green Green List (high evidence)
ALDH18A1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Cutis laxa, autosomal recessive, type IIIA MIM#219150
  • Spastic paraplegia 9A, autosomal dominant MIM#601162
  • Spastic paraplegia 9B, autosomal recessive MIM#616586
  • Cutis laxa, autosomal dominant 3 MIM#616603
  • disorders of ornithine or proline metabolism
Tags
Green Green List (high evidence)
ALDH3A2
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Phenotypes
  • Sjogren-Larsson syndrome MIM#270200
  • disorder of lipid metabolism
Tags
Green Green List (high evidence)
ALDH4A1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Hyperprolinemia, type II MIM#239510
  • disorders of ornithine or proline metabolism
Tags
Green Green List (high evidence)
ALDH5A1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Phenotypes
  • Succinic semialdehyde dehydrogenase deficiency MIM#271980
  • disorder of neurotransmitter metabolism
Tags
Green Green List (high evidence)
ALDH6A1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Methylmalonate semialdehyde dehydrogenase deficiency MIM#614105
  • disorder of valine and pyrimidine metabolism
Tags
Green Green List (high evidence)
ALDH7A1
3 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Phenotypes
  • Epilepsy, pyridoxine-dependent MM#266100
  • disorder of lysine metabolism
Tags
  • treatable
Green Green List (high evidence)
ALDOB
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Fructose intolerance, hereditary, MIM# 229600
Tags
Green Green List (high evidence)
ALPL
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Hypophosphatasia
  • disorder of bone metabolism
Tags
Green Green List (high evidence)
AMT
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Glycine encephalopathy MIM#605899
  • disorder of glycine metabolism
Tags
Green Green List (high evidence)
ARG1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Argininemia MIM#207800
  • Urea cycle disorders and inherited hyperammonaemias
  • disorder of arginine metabolism
Tags
  • treatable
Green Green List (high evidence)
ASL
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Phenotypes
  • Argininosuccinic aciduria MIM#207900
  • Urea cycle disorders and inherited hyperammonaemias
  • disorder of amino acid metabolism
Tags
  • treatable
Green Green List (high evidence)
ASPA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Canavan disease MIM#271900
  • disorder of amino acid metabolism
Tags
Green Green List (high evidence)
ASS1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Citrullinemia MIM#215700
  • Urea cycle disorders and inherited hyperammonaemias
  • disorder of amino acid metabolism
Tags
  • treatable
Green Green List (high evidence)
ATIC
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Phenotypes
  • AICA-ribosiduria due to ATIC deficiency MIM#608688
  • disorders of purine metabolism
Tags
Green Green List (high evidence)
ATP7A
2 reviews
2 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Menkes disease MIM#309400
  • Occipital horn syndrome MIM#304150
  • disorder of copper matabolism
Tags
Green Green List (high evidence)
ATP8B1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Cholestasis, progressive familial intrahepatic 1 MIM#211600
  • disorder of bile acid metabolism
Tags
Green Green List (high evidence)
BAAT
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Bile acid conjugation defect 1, MIM# 619232
  • Hypercholanemia, familial MIM#607748
  • disorder of bile acid metabolism
Tags
Green Green List (high evidence)
BTD
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Biotinidase deficiency MIM#253260
  • disorder of biotin metabolism
Tags
  • treatable
Green Green List (high evidence)
CBS
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Homocystinuria, B6-responsive and nonresponsive types MIM#236200
  • disorder of intracellular cobalamin metabolism
  • metabolic disorder of sulfur metabolism
Tags
  • treatable
Green Green List (high evidence)
CTSC
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Haim-Munk syndrome MIM#245010
  • Papillon-Lefevre syndrome MIM#245000
  • other lysosomal disorder
Tags
Green Green List (high evidence)
CYP27A1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Cerebrotendinous xanthomatosis MIM#213700
  • Disorders of bile acid biosynthesis
Tags
Green Green List (high evidence)
CYP7B1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Bile acid synthesis defect, congenital, 3 MIM#613812
  • Spastic paraplegia 5A, autosomal recessive MIM#270800
  • Disorders of bile acid biosynthesis
Tags
Green Green List (high evidence)
DHCR24
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Desmosterolosis MIM#602398
  • Disorders of the metabolism of sterols
Tags
Green Green List (high evidence)
DHCR7
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Smith-Lemli-Opitz syndrome MIM#270400
  • Disorders of sterol biosynthesis
Tags
Green Green List (high evidence)
DHODH
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Miller syndrome MIM#263750
  • Disorders of pyrimidine metabolism
Tags
Green Green List (high evidence)
DHTKD1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • 2-aminoadipic 2-oxoadipic aciduria MIM#204750
  • Disorders of histidine, tryptophan or lysine metabolism
Tags
Green Green List (high evidence)
DPYD
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Dihydropyrimidine dehydrogenase deficiency MIM#274270
  • 5-fluorouracil toxicity MIM#274270
  • Disorders of pyrimidine metabolism
Tags
  • pharmacogenomic
Green Green List (high evidence)
DPYS
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Phenotypes
  • Dihydropyrimidinuria MIM#222748
  • Disorders of pyrimidine metabolism
Tags
Green Green List (high evidence)
EPG5
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Phenotypes
  • Vici syndrome MIM#242840
  • Congenital disorders of autophagy
Tags
Green Green List (high evidence)
FDFT1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • squalene synthase deficiency MONDO:0032566
Tags
Green Green List (high evidence)
FMO3
3 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Victorian Clinical Genetics Services
Phenotypes
  • Trimethylaminuria MIM#602079
  • Disorders and variants of other enzymes that oxidise xenobiotics
Tags
Green Green List (high evidence)
FTCD
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Glutamate formiminotransferase deficiency MIM#229100
  • Disorders of histidine, tryptophan or lysine metabolism
Tags
Green Green List (high evidence)
GALE
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Galactose epimerase deficiency MIM#230350
  • Disorders of galactose metabolism
Tags
  • treatable
Green Green List (high evidence)
GALK1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Galactokinase deficiency with cataracts MIM#230200
  • Disorders of galactose metabolism
Tags
  • treatable
Green Green List (high evidence)
GALM
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
  • NHS GMS
Phenotypes
  • Galactosemia IV MIM#618881
  • Disorders of galactose metabolism
Tags
Green Green List (high evidence)
GALT
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Galactosemia MIM#230400
  • Disorders of galactose metabolism
Tags
  • treatable
Green Green List (high evidence)
GAMT
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Cerebral creatine deficiency syndrome 2 MIM#612736
  • Disorders of creatinine metabolism
Tags
  • treatable
Green Green List (high evidence)
GATM
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Cerebral creatine deficiency syndrome 3 MIM#612718
Tags
Green Green List (high evidence)
GCDH
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Glutaricaciduria, type I MIM#231670
  • Organic acidurias
Tags
  • treatable
Green Green List (high evidence)
GCLC
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Hemolytic anemia due to gamma-glutamylcysteine synthetase deficiency MIM#230450
  • Disorders of the gamma-glutamyl cycle
Tags
Green Green List (high evidence)
GDPAG
STR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Global developmental delay, progressive ataxia, and elevated glutamine MIM#618412
Tags
Green Green List (high evidence)
GK
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Glycerol kinase deficiency MIM#307030
  • Disorders of glycerol metabolism
Tags
Green Green List (high evidence)
GLDC
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Glycine encephalopathy MIM#605899
  • Disorders of serine, glycine or glycerate metabolism
Tags
Green Green List (high evidence)
GLS
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Developmental and epileptic encephalopathy 71 MIM#618328
  • Global developmental delay, progressive ataxia, and elevated glutamine MIM#618412
  • disorder of amino acid metabolism
Tags
Green Green List (high evidence)
GLUL
2 reviews
2 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Glutamine deficiency, congenital MIM#610015
  • Developmental and epileptic encephalopathy 116, MIM# 620806
Tags
Green Green List (high evidence)
GLYCTK
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • D-glyceric aciduria MIM#220120
  • Disorders of serine, glycine or glycerate metabolism
Tags
Green Green List (high evidence)
GNMT
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Glycine N-methyltransferase deficiency MIM#606664
  • Disorders of the metabolism of sulphur amino acids
Tags
Green Green List (high evidence)
GPD1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Hypertriglyceridemia, transient infantile MIM#614480
  • glycerol-3-phosphate dehydrogenase deficiency
Tags
Green Green List (high evidence)
GPHN
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Molybdenum cofactor deficiency C MIM#615501
  • Disorders of molybdenum cofactor metabolism
Tags
Green Green List (high evidence)
GSS
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Glutathione synthetase deficiency MIM#266130
  • Hemolytic anemia due to glutathione synthetase deficiency MIM#231900
  • Disorders of the gamma-glutamyl cycle
Tags
Green Green List (high evidence)
HAAO
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Vertebral, cardiac, renal, and limb defects syndrome 1 MIM#617660
  • NAD deficiency
Tags
Green Green List (high evidence)
HGD
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Alkaptonuria MIM#203500
  • Disorders of phenylalanine or tyrosine metabolism
Tags
Green Green List (high evidence)
HPD
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Hawkinsinuria MIM#140350
  • Tyrosinemia, type III MIM#276710
  • Disorders of phenylalanine or tyrosine metabolism
Tags
Green Green List (high evidence)
HS2ST1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Neurofacioskeletal syndrome with or without renal agenesis, MIM#619194
  • Developmental delay and corpus callosum, skeletal, and renal abnormalities
  • disorder of glycosaminoglycan metabolism
Tags
Green Green List (high evidence)
HSD3B7
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Bile acid synthesis defect, congenital, 1 MIM#607765
  • Disorders of bile acid biosynthesis
Tags
Green Green List (high evidence)
ITPA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Inosine triphosphatase deficiency MIM#613850
  • Developmental and epileptic encephalopathy 35 MIM#616647
  • Disorders of purine metabolism
Tags
Green Green List (high evidence)
KYNU
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Hydroxykynureninuria MIM#236800
  • Vertebral, cardiac, renal, and limb defects syndrome 2 MIM#617661
  • Disorders of histidine, tryptophan or lysine metabolism
Tags
Green Green List (high evidence)
L2HGDH
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • L-2-hydroxyglutaric aciduria MIM#236792
  • organic acidurias
Tags
Green Green List (high evidence)
LARS
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Infantile liver failure syndrome 1 MIM#615438
  • disorder of leucine metabolism
Tags
Green Green List (high evidence)
LBR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Greenberg skeletal dysplasia MIM#215140
  • Disorders of sterol biosynthesis
Tags
Green Green List (high evidence)
LCT
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Lactase deficiency, congenital MIM#223000
  • Other carbohydrate disorders
Tags
Green Green List (high evidence)
MAT1A
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Hypermethioninemia, persistent, autosomal dominant, due to methionine adenosyltransferase I/III deficiency MIM#250850
  • Methionine adenosyltransferase deficiency, autosomal recessive MIM#250850
  • Disorders of the metabolism of sulphur amino acids
Tags
Green Green List (high evidence)
MCCC1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • 3-Methylcrotonyl-CoA carboxylase 1 deficiency MIM#210200
  • Organic acidurias
Tags
Green Green List (high evidence)
MCCC2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • 3-Methylcrotonyl-CoA carboxylase 2 deficiency MIM#210210
  • Organic acidurias
Tags
Green Green List (high evidence)
MCEE
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Methylmalonyl-CoA epimerase deficiency MIM#251120
  • Organic acidurias
Tags
Green Green List (high evidence)
MOCS1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Molybdenum cofactor deficiency A MIM#252150
  • Disorders of molybdenum cofactor metabolism
Tags
  • treatable
Green Green List (high evidence)
MOCS2
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Molybdenum cofactor deficiency B MIM#252160
  • Disorders of molybdenum cofactor metabolism
Tags
Green Green List (high evidence)
MSMO1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Microcephaly, congenital cataract, and psoriasiform dermatitis MIM#616834
  • Disorders of the metabolism of sterols
  • MONDO:0014793
Tags
Green Green List (high evidence)
MTHFR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Homocystinuria due to MTHFR deficiency MIM#236250
  • Disorders of folate metabolism and transport
Tags
Green Green List (high evidence)
MTRR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Homocystinuria-megaloblastic anemia, cbl E type MIM#236270
  • Disorders of the metabolism of sulphur amino acids
Tags
Green Green List (high evidence)
MVK
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Mevalonic aciduria MIM#610377
  • Disorders of sterol biosynthesis
Tags
Green Green List (high evidence)
NSDHL
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • CHILD syndrome MIM#308050
  • Disorders of sterol biosynthesis
Tags
Green Green List (high evidence)
NT5C3A
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Anemia, hemolytic, due to UMPH1 deficiency MIM#266120
  • disorder of pyrimidine metabolism
Tags
Green Green List (high evidence)
OAT
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Gyrate atrophy of choroid and retina with or without ornithinemia - MIM#258870
Tags
Green Green List (high evidence)
PAH
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Phenylketonuria MIM#261600
  • Disorders of phenylalanine or tyrosine metabolism
Tags
  • treatable
Green Green List (high evidence)
PCK1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Phosphoenolpyruvate carboxykinase deficiency, cytosolic MIM#261680
  • Disorders of gluconeogenesis
Tags
Green Green List (high evidence)
PDXK
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Neuropathy, hereditary motor and sensory, type VIC, with optic atrophy MIM#618511
  • Disorders of pyridoxine metabolism
Tags
Green Green List (high evidence)
PEPD
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Prolidase deficiency MIM#170100
  • disorders of peptide metabolism
Tags
Green Green List (high evidence)
PHGDH
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Neu-Laxova syndrome 1 256520
  • Phosphoglycerate dehydrogenase deficiency 601815
Tags
Green Green List (high evidence)
PNP
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Immunodeficiency due to purine nucleoside phosphorylase deficiency, MIM# 613179
Tags
Green Green List (high evidence)
POR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Antley-Bixler syndrome with genital anomalies and disordered steroidogenesis 201750
  • Disordered steroidogenesis due to cytochrome P450 oxidoreductase 613571
Tags
Green Green List (high evidence)
PREPL
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Myasthenic syndrome, congenital, 22 MIM#616224
  • hypotonia-cystinuria syndrome
  • Disorders of amino acid transport
Tags
  • SV/CNV
Green Green List (high evidence)
PRODH
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Hyperprolinemia, type I 239500
  • Proline oxidase deficiency
Tags
Green Green List (high evidence)
PRPS1
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Arts syndrome 301835
  • Charcot-Marie-Tooth disease, X-linked recessive, 5 311070
  • Deafness, X-linked 1 304500
  • Gout, PRPS-related 300661
  • Phosphoribosylpyrophosphate synthetase superactivity 300661
Tags
Green Green List (high evidence)
PSAT1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Phosphoserine aminotransferase deficiency MIM#610992
  • Neu-Laxova syndrome 2 MIM#616038
Tags
Green Green List (high evidence)
PSPH
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Phosphoserine phosphatase deficiency MIM#614023
  • Disorders of serine, glycine or glycerate metabolism
Tags
Green Green List (high evidence)
PYCR1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Cutis laxa, autosomal recessive, type IIB MIM#612940
  • Cutis laxa, autosomal recessive, type IIIB MIM#614438
  • Disorders of ornithine or proline metabolism
Tags
Green Green List (high evidence)
RBP4
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Microphthalmia, isolated, with coloboma 10, MIM# 616428
  • Retinal dystrophy, iris coloboma, and comedogenic acne syndrome, MIM# 615147
Tags
Green Green List (high evidence)
RPIA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Ribose 5-phosphate isomerase deficiency, MIM# 608611
  • Leukoencephalopathy
Tags
Green Green List (high evidence)
SAR1B
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Chylomicron retention disease, MIM# 246700
Tags
Green Green List (high evidence)
SC5D
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Lathosterolosis, MIM# 607330
Tags
Green Green List (high evidence)
SI
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Sucrase-isomaltase deficiency, congenital, MIM# 222900
Tags
Green Green List (high evidence)
SLC10A1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Familial hypercholanemia-2, MIM#619256
Tags
Green Green List (high evidence)
SLC16A1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Monocarboxylate transporter 1 deficiency, MIM# 616095
Tags
Green Green List (high evidence)
SLC2A1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • GLUT1 deficiency syndrome 1, infantile onset, severe, 606777
  • GLUT1 deficiency syndrome 2, childhood onset, 612126
  • Disorders of glucose transport
Tags
Green Green List (high evidence)
SLC30A10
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Hypermanganesemia with dystonia 1, MIM# 613280
Tags
Green Green List (high evidence)
SLC39A14
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Hypermanganesemia with dystonia 2, MIM# 617013
Tags
Green Green List (high evidence)
SLC39A4
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Acrodermatitis enteropathica MIM#201100
  • (Disorder of zinc metabolism)
Tags
Green Green List (high evidence)
SLC46A1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Folate malabsorption, hereditary, MIM# 229050
Tags
Green Green List (high evidence)
SLC5A1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Glucose/galactose malabsorption MIM# 606824
  • (Disorders of glucose transport)
Tags
Green Green List (high evidence)
SLC5A6
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Neurodegeneration, infantile-onset, biotin-responsive, MIM# 618973
Tags
Green Green List (high evidence)
SLC6A19
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Hartnup disorder, MIM# 234500
  • Hyperglycinuria, MIM# 138500
  • Iminoglycinuria, MIM# 242600
Tags
Green Green List (high evidence)
SLC6A8
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Cerebral creatine deficiency syndrome 1, MIM# 300352
Tags
Green Green List (high evidence)
SPTLC1
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Neuropathy, hereditary sensory and autonomic, type IA, MIM# 162400
  • Serine palmitoyl transferase deficiency (Disorders of complex lipid synthesis)
Tags
Green Green List (high evidence)
SPTLC2
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Neuropathy, hereditary sensory and autonomic, type IC, MIM# 613640
  • Serine palmitoyl transferase deficiency (Disorders of complex lipid synthesis)
Tags
Green Green List (high evidence)
STS
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Ichthyosis, X-linked 308100
  • Sterol metabolism disorder
Tags
  • SV/CNV
Green Green List (high evidence)
SUOX
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Sulfite oxidase deficiency, MIM# 272300
Tags
Green Green List (high evidence)
TALDO1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Transaldolase deficiency , MIM#606003
Tags
Green Green List (high evidence)
TAT
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Tyrosinemia, type II, MIM# 276600
Tags
  • treatable
Green Green List (high evidence)
TREX1
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Aicardi-Goutieres syndrome 1, dominant and recessive, MIM# 225750
  • Disorder of nucleotide metabolism
Tags
Green Green List (high evidence)
TTPA
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Ataxia with isolated vitamin E deficiency MIM#277460
  • disorders of vitamins and cofactors
Tags
Green Green List (high evidence)
UGT1A1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Bilirubin UDP-glucuronosyltransferase 1 deficiency (Disorders of bile acid metabolism and transport)
  • Crigler-Najjar syndrome, type I 218800
  • Crigler-Najjar syndrome, type II 606785
Tags
Green Green List (high evidence)
UMPS
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Orotic aciduria, MIM# 258900
Tags
Green Green List (high evidence)
UPB1
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Beta-ureidopropionase deficiency, MIM# 613161
Tags
Green Green List (high evidence)
WDR45
2 reviews
2 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Neurodegeneration with brain iron accumulation 5, MIM# 300894
Tags
Amber Amber List (moderate evidence)
AASS
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • NHS GMS
  • Victorian Clinical Genetics Services
Phenotypes
  • Hyperlysinemia, MIM# 238700
Tags
  • disputed
Amber Amber List (moderate evidence)
ACSF3
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • NHS GMS
Phenotypes
  • Combined malonic and methylmalonic aciduria MIM#614265
Tags
Amber Amber List (moderate evidence)
CD320
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Methylmalonic aciduria, transient, due to transcobalamin receptor defect MIM#613646
  • Disorders of cobalamin absorption, transport and metabolism
Tags
Amber Amber List (moderate evidence)
CTH
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • NHS GMS
Phenotypes
  • Cystathioninuria MIM#219500
Tags
Amber Amber List (moderate evidence)
DCXR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • NHS GMS
Phenotypes
  • Pentosuria MIM#260800
  • Disorders of pentose metabolism
Tags
Amber Amber List (moderate evidence)
DMGDH
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Dimethylglycine dehydrogenase deficiency MIM#605850
  • Disorders and variants of other enzymes that oxidise xenobiotics
Tags
Amber Amber List (moderate evidence)
GGT1
1 review
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Glutathioninuria MIM#231950
  • Disorders of the gamma-glutamyl cycle
Tags
  • SV/CNV
Amber Amber List (moderate evidence)
HAL
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Histidinemia MIM#235800
  • Disorders of histidine, tryptophan or lysine metabolism
Tags
Amber Amber List (moderate evidence)
KHK
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Fructosuria MIM#229800
  • Disorders of fructose metabolism
Tags
Amber Amber List (moderate evidence)
OPLAH
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • NHS GMS
Phenotypes
  • 5-oxoprolinase deficiency MIM#260005
  • Disorders of the gamma-glutamyl cycle
Tags
Amber Amber List (moderate evidence)
SARDH
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Sarcosinemia MIM#268900
  • Disorders of serine, glycine or glycerate metabolism
Tags
Amber Amber List (moderate evidence)
SHPK
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Sedoheptulokinase deficiency MIM#617213
Tags
Amber Amber List (moderate evidence)
SLC1A1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Amber
Phenotypes
  • Dicarboxylic aminoaciduria, MIM#222730
Tags
Amber Amber List (moderate evidence)
SLC36A2
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Hyperglycinuria MIM#138500
  • Iminoglycinuria, digenic MIM#242600
  • Disorders of amino acid transport
Tags
Amber Amber List (moderate evidence)
SUGCT
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Glutaric aciduria III MIM#231690
  • Organic acidurias
Tags
Amber Amber List (moderate evidence)
UROC1
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Amber
Phenotypes
  • Urocanase deficiency, MIM#276880
Tags
Red Red List (low evidence)
GCSH
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Glycine encephalopathy MIM#605899
  • Disorders of serine, glycine or glycerate metabolism
Tags
Red Red List (low evidence)
HIBADH
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • organic aciduria
Tags
Red Red List (low evidence)
NAT8L
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • N-acetylaspartate deficiency - MIM#614063
Tags
Red Red List (low evidence)
SLC27A5
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Bile acid-CoA ligase deficiency
  • Disorders of bile acid biosynthesis
Tags
Red Red List (low evidence)
TDO2
1 review
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Hypertryptophanemia MIM#600627
  • Disorders of histidine, tryptophan or lysine metabolism
Tags

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