Description
This panel contains reported short tandem repeat (STR) expansion disorders. The naming convention of the STRs is based on the name of the condition or fragile site that the expansion is associated with. 
The panel was developed by RMH and WEHI, and is maintained by RMH.

This panel is used as a research panel by the Australian Genomics Acute Care study.

1 reviewer

  • Bryony Thompson (Royal Melbourne Hospital)

75 Entities

75 reviewed, 58 green

List Entity Reviews Mode of inheritance Details
75 Entitiess
Green Green List (high evidence)
BPES
STR
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Blepharophimosis, epicanthus inversus, and ptosis type 1 and 2 MIM#110100
  • Premature ovarian failure 3 MIM#608996
Tags
  • paediatric-onset
Green Green List (high evidence)
CANVAS
STR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Cerebellar ataxia, neuropathy, and vestibular areflexia syndrome MIM#614575
Tags
  • adult-onset
Green Green List (high evidence)
CCHS
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Central hypoventilation syndrome, congenital, with or without Hirschsprung disease MIM#209880
Tags
  • paediatric-onset
Green Green List (high evidence)
CJD
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Creutzfeldt-Jakob disease MIM#123400
  • Gerstmann-Straussler disease MIM#137440
Tags
  • adult-onset
Green Green List (high evidence)
DBQD2
STR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Desbuquois dysplasia 2 MIM#615777
Tags
  • paediatric-onset
Green Green List (high evidence)
DM1
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Myotonic dystrophy 1 MIM#160900
Tags
  • adult-onset
  • paediatric-onset
Green Green List (high evidence)
DM2
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Myotonic dystrophy 2 MIM#602668
Tags
  • adult-onset
Green Green List (high evidence)
DRPLA
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Dentatorubral-pallidoluysian atrophy MIM#125370
Tags
  • adult-onset
  • paediatric-onset
Green Green List (high evidence)
EIEE1_tract1
STR
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Developmental and epileptic encephalopathy 1 MIM#308350
  • Intellectual disability, X-linked 29 and others MIM#300419
  • Partington syndrome MIM#309510
Tags
  • paediatric-onset
Green Green List (high evidence)
EIEE1_tract2
STR
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Developmental and epileptic encephalopathy 1 MIM#308350
  • Intellectual disability, X-linked 29 and others MIM#300419
  • Partington syndrome MIM#309510
Tags
  • paediatric-onset
Green Green List (high evidence)
EPM1
STR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Epilepsy, progressive myoclonic 1A (Unverricht and Lundborg) MIM#254800
Tags
  • paediatric-onset
Green Green List (high evidence)
FAME1
STR
1 review
1 green
BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Epilepsy, familial adult myoclonic, 1 MIM#601068
Tags
  • adult-onset
Green Green List (high evidence)
FAME2
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Epilepsy, familial adult myoclonic, 2 MIM#607876
Tags
  • adult-onset
Green Green List (high evidence)
FAME3
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Epilepsy, familial adult myoclonic, 3 MIM#613608
Tags
  • adult-onset
Green Green List (high evidence)
FECD3
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Corneal dystrophy, Fuchs endothelial, 3 MIM#613267
Tags
  • adult-onset
Green Green List (high evidence)
FRAXE
STR
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Intellectual developmental disorder, X-linked 109 MIM#309548
Tags
  • paediatric-onset
Green Green List (high evidence)
FRDA
STR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Friedreich ataxia MIM#229300
Tags
  • paediatric-onset
Green Green List (high evidence)
FTDALS
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Frontotemporal dementia and/or amyotrophic lateral sclerosis 1 MIM#105550
Tags
  • adult-onset
Green Green List (high evidence)
FXPOI
STR
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Premature ovarian failure 1 MIM#311360
Tags
  • adult-onset
Green Green List (high evidence)
FXS
STR
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Fragile X syndrome MIM#300624
Tags
  • paediatric-onset
Green Green List (high evidence)
FXTAS
STR
1 review
1 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Fragile X tremor/ataxia syndrome MIM#300623
Tags
  • adult-onset
Green Green List (high evidence)
GDPAG
STR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Global developmental delay, progressive ataxia, and elevated glutamine MIM#618412
Tags
  • paediatric-onset
Green Green List (high evidence)
HD
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Huntington disease MIM#143100
Tags
  • adult-onset
Green Green List (high evidence)
HDL2
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Huntington disease-like 2 MIM#606438
Tags
  • adult-onset
Green Green List (high evidence)
HFGS_tract1
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Hand-foot-uterus syndrome MIM#140000
Tags
  • paediatric-onset
Green Green List (high evidence)
HFGS_tract2
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Hand-foot-uterus syndrome MIM#140000
Tags
  • paediatric-onset
Green Green List (high evidence)
HFGS_tract3
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Hand-foot-uterus syndrome MIM#140000
Tags
  • paediatric-onset
Green Green List (high evidence)
HMNMYO
STR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Neuropathy, hereditary motor, with myopathic features MIM#619216
Tags
  • paediatric-onset
Green Green List (high evidence)
HPE5
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Holoprosencephaly 5 MIM#609637
Tags
  • paediatric-onset
Green Green List (high evidence)
HSAN8
STR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Neuropathy, hereditary sensory and autonomic, type VIII MIM#616488
Tags
  • paediatric-onset
Green Green List (high evidence)
MEDPSACH
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Epiphyseal dysplasia, multiple, 1 MIM#132400
  • Pseudoachondroplasia MIM#177170
Tags
  • paediatric-onset
Green Green List (high evidence)
MRUPAV
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • myopathy, distal, with rimmed vacuoles MONDO:0014945
Tags
  • adult-onset
Green Green List (high evidence)
NIID
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Neuronal intranuclear inclusion disease MIM#603472
  • Oculopharyngodistal myopathy 3 MIM#619473
  • Tremor, hereditary essential, 6 MIM#618866
Tags
  • adult-onset
Green Green List (high evidence)
OPDM1
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Oculopharyngodistal myopathy 1 MIM#164310
  • Amyotrophic lateral sclerosis MONDO:0004976
Tags
  • adult-onset
Green Green List (high evidence)
OPDM2
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Oculopharyngodistal myopathy 2 MIM#618940
Tags
  • adult-onset
Green Green List (high evidence)
OPDM4
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Oculopharyngodistal myopathy MONDO:0025193
Tags
Green Green List (high evidence)
OPDM_ABCD3_GCC
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Other
Phenotypes
  • Oculopharyngodistal myopathy MONDO:0025193
Tags
Green Green List (high evidence)
OPMD
STR
1 review
1 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Oculopharyngeal muscular dystrophy MIM#164300
Tags
  • adult-onset
Green Green List (high evidence)
PHPX
STR
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Intellectual disability, X-linked, with isolated growth hormone deficiency MIM#300123
  • Panhypopituitarism, X-linked MIM#312000
Tags
  • paediatric-onset
Green Green List (high evidence)
RCPS
STR
1 review
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Robin sequence with cleft mandible and limb anomalies MIM#268305
  • Richieri-Costa-Pereira syndrome
Tags
  • paediatric-onset
Green Green List (high evidence)
SBMA
STR
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Spinal and bulbar muscular atrophy of Kennedy MIM#313200
Tags
  • adult-onset
Green Green List (high evidence)
SCA1
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Spinocerebellar ataxia 1 MIM#164400
Tags
  • adult-onset
Green Green List (high evidence)
SCA10
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Spinocerebellar ataxia 10 MIM#603516
Tags
  • adult-onset
Green Green List (high evidence)
SCA12
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Spinocerebellar ataxia 12 MIM#604326
Tags
  • adult-onset
  • paediatric-onset
Green Green List (high evidence)
SCA17
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Spinocerebellar ataxia 17 MIM#607136
Tags
  • adult-onset
  • paediatric-onset
Green Green List (high evidence)
SCA2
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Spinocerebellar ataxia 2 MIM#183090
Tags
  • adult-onset
  • paediatric-onset
Green Green List (high evidence)
SCA27B
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Spinocerebellar ataxia type 27B MONDO:0012247
  • Spinocerebellar ataxia 50
  • late-onset cerebellar ataxias (LOCAs)
Tags
Green Green List (high evidence)
SCA3
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Machado-Joseph disease MIM#109150
  • Spinocerebellar ataxia type 3
Tags
  • adult-onset
  • paediatric-onset
Green Green List (high evidence)
SCA31
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Spinocerebellar ataxia 31 MIM#117210
Tags
  • adult-onset
Green Green List (high evidence)
SCA36
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Spinocerebellar ataxia 36 MIM#614153
Tags
  • adult-onset
Green Green List (high evidence)
SCA37
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Spinocerebellar ataxia 37 MIM#615945
Tags
  • adult-onset
Green Green List (high evidence)
SCA4_ZFHX3_GGC
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • spinocerebellar ataxia type 4 MONDO:0010847
Tags
Green Green List (high evidence)
SCA6
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Spinocerebellar ataxia 6 MIM#183086
  • Episodic ataxia, type 2 MIM#108500
Tags
  • adult-onset
Green Green List (high evidence)
SCA7
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Spinocerebellar ataxia 7 MIM#164500
Tags
  • adult-onset
Green Green List (high evidence)
SCA8
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Spinocerebellar ataxia 8 MIM#608768
Tags
  • adult-onset
Green Green List (high evidence)
SPD1
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Synpolydactyly 1 MIM#186000
Tags
  • paediatric-onset
Green Green List (high evidence)
TOF
STR
1 review
1 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
Phenotypes
  • Tetralogy of Fallot MIM#187500
Tags
  • paediatric-onset
Green Green List (high evidence)
XDP
STR
1 review
1 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert list
  • Expert Review Green
Phenotypes
  • Dystonia-Parkinsonism, X-linked MIM#314250
Tags
  • adult-onset
  • founder
Amber Amber List (moderate evidence)
CANVAS_ACAGG
STR
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Cerebellar ataxia, neuropathy, and vestibular areflexia syndrome
  • fasciculations
  • elevated serum creatine kinase levels
  • denervation
Tags
  • adult-onset
Amber Amber List (moderate evidence)
CCD
STR
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert list
  • Expert Review Amber
Phenotypes
  • Cleidocranial dysplasia MIM#119600
Tags
  • paediatric-onset
Amber Amber List (moderate evidence)
DMD
STR
1 review
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Duchenne muscular dystrophy MIM#310200
  • Becker muscular dystrophy MIM#300376
Tags
  • adult-onset
  • paediatric-onset
Amber Amber List (moderate evidence)
FAME7
STR
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Epilepsy, familial adult myoclonic, 7 MIM#618075
Tags
  • adult-onset
Amber Amber List (moderate evidence)
FRA12A
STR
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Mental retardation, FRA12A type MIM#136630
Tags
  • paediatric-onset
Amber Amber List (moderate evidence)
FRA2A
STR
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Neurodevelopmental delay
Tags
  • paediatric-onset
Amber Amber List (moderate evidence)
FRA7A
STR
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Autism spectrum disorder
Tags
  • paediatric-onset
Amber Amber List (moderate evidence)
SCA_THAP11_CAG
STR
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Other
Phenotypes
  • autosomal dominant cerebellar ataxia MONDO:0020380
Tags
Red Red List (low evidence)
FAME1_TTTGA
STR
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • familial cortical myoclonic tremor with epilepsy
Tags
Red Red List (low evidence)
FAME4
STR
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Epilepsy, myoclonic, familial adult, 4 MIM#615127
Tags
  • adult-onset
Red Red List (low evidence)
FAME6
STR
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Epilepsy, familial adult myoclonic, 6 MIM#618074
Tags
  • adult-onset
Red Red List (low evidence)
FRA11A
STR
1 review
1 red
Unknown
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Intellectual disability
Tags
  • paediatric-onset
Red Red List (low evidence)
FRA11B
STR
1 review
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Jacobsen syndrome MIM#147791
Tags
  • paediatric-onset
Red Red List (low evidence)
FRAXF
STR
1 review
1 red
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Intellectual disability
Tags
  • paediatric-onset
Red Red List (low evidence)
NIPA1
STR
1 review
1 green
Unknown
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Amyotrophic lateral sclerosis
Tags
  • adult-onset
Red Red List (low evidence)
OPML1
STR
1 review
1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • Oculopharyngeal myopathy with leukoencephalopathy 1 MIM#618637
Tags
  • adult-onset
Red Red List (low evidence)
VACTERLX
STR
1 review
1 red
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • VACTERL association, X-linked MIM#314390
Tags
  • paediatric-onset

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